RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 NKX6-3A6NJ46 265 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 FAM86B1E9PN63 330 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 NPIPA3F8WFD2 350 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 SLC30A4O14863 429 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 SLC22A2O15244 555 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ARHGEF9O43307 516 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 SOCS5O75159 536 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 KHDRBS3O75525 346 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 TRMUO75648 421 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 NXPH2O95156 264 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ACSL3O95573 720 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 BAG2O95816 211 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 YES1P07947 543 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ZFYP08048 801 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 FAM86B2P0C5J1 330 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 FAM58BPP0C7Q3 252 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 P4HA1P13674 534 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 GNB3P16520 340 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 STMN1P16949 149 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ADRA2CP18825 462 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 CYP11B2P19099 503 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 TSFMP43897 325 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 IER3P46695 156 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 NR0B1P51843 470 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 MTCP1P56278 107 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 NME5P56597 212 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 CLDN15P56746 228 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 HNRNPKP61978 463 aaKnown RBP eCLIP2.26□□□□□ -2.05
COPS3-213ENST00000577210 CYCSP99999 105 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 ACTN3Q08043 901 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 IL10RBQ08334 325 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ZNF415Q09FC8 603 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 TNK1Q13470 666 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 TRIM29Q14134 588 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 HERC3Q15034 1050 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 PKN2Q16513 984 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 TAZQ16635 292 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 MTHFSDQ2M296 383 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 DNAJC21Q5F1R6 531 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.26□□□□□ -2.05
COPS3-213ENST00000577210 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 UGT3A1Q6NUS8 523 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 CASC4Q6P4E1 433 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 TMEM270Q6UE05 265 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 MEX3BQ6ZN04 569 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 OTOAQ7RTW8 1153 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 GPR141Q7Z602 305 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 RCOR2Q8IZ40 523 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 CIARTQ8N365 385 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 CCDC63Q8NA47 563 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 NHLRC2Q8NBF2 726 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 TMEM178AQ8NBL3 297 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 NEK11Q8NG66 645 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 OR7A2PQ8NGA2 310 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 OR8H1Q8NGG4 311 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 OR4D10Q8NGI6 311 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 NCOA7Q8NI08 942 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 MAPK15Q8TD08 544 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 RSPH1Q8WYR4 309 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 DNASE1L2Q92874 299 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 P2RX5Q93086 422 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ZNF501Q96CX3 271 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 TBC1D31Q96DN5 1066 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 BSCL2Q96G97 398 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 GMPPAQ96IJ6 420 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 C4orf45Q96LM5 186 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 SPATA33Q96N06 139 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 PARK7Q99497 189 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 FSD1Q9BTV5 496 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 CDK19Q9BWU1 502 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 WDR13Q9H1Z4 485 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 PELI2Q9HAT8 420 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 SDF2L1Q9HCN8 221 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 AKAP7Q9P0M2 348 aaPredicted RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 PRDM4Q9UKN5 801 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 ITGA11Q9UKX5 1188 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 WDR37Q9Y2I8 494 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 KNSTRNQ9Y448 316 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 RIPK3Q9Y572 518 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 RNF123Q5XPI4 1314 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 LRRD1A4D1F6 860 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 SDR42E2A6NKP2 422 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 YDJCA8MPS7 323 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 KPNA7A9QM74 516 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 F8VVB4 439 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 F8VWA3 439 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 TEX28O15482 410 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 FLRT2O43155 660 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 KINO60870 393 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 NADKO95544 446 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 MOCS2O96007 188 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 RAF1P04049 648 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 SUPT20HL2P0C7V6 817 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 PATE4P0C8F1 98 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 THEGLP0DJG4 465 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 CEACAM1P13688 526 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 TCF4P15884 667 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 TYMPP19971 482 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 HLA-DPA1P20036 260 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 AADACP22760 399 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms