RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ANKRD13BQ86YJ7 626 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 TCAIMQ8N3R3 496 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 TRMT61BQ9BVS5 477 aaKnown RBP17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 ASPNQ9BXN1 380 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 CHIAQ9BZP6 476 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 ZNF224Q9NZL3 707 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 SESN1Q9Y6P5 492 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 PRAMEF33A0A0G2JMD5 474 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 ILVBLA1L0T0 632 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 NDUFB5O43674 189 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 PRAMEF10O60809 474 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 GSTT2P0CG29 244 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 GSTT2BP0CG30 244 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 GADD45AP24522 165 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 RGS8P57771 180 aaPredicted RBP17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 NPRL3Q12980 569 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 VMACQ2NL98 169 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 TBRG1Q3YBR2 411 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 IER5LQ5T953 404 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 LCN1P1Q5VSP4 162 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 UBE2UQ5VVX9 321 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 LRRC66Q68CR7 880 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 SUSD6Q92537 303 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 CCDC3Q9BQI4 270 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 RSPH9Q9H1X1 276 aaPredicted RBP17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 ANKRA2Q9H9E1 313 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 TNFRSF12AQ9NP84 129 aa17.36■□□□□ 0.37
ATPAF1-214ENST00000576409 EFCAB14O75071 495 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 RPL3P39023 403 aaKnown RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 ARCN1P48444 511 aaKnown RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 CLCN4P51793 760 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 XKP51811 444 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 CSTF1Q05048 431 aaKnown RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 KANK2Q63ZY3 851 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 HMBOX1Q6NT76 420 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 Q6ZPB1 254 aaPredicted RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 ACDQ96AP0 544 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 TEX37Q96LM6 180 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 TMEM246Q9BRR3 403 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 MED28Q9H204 178 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 TM9SF3Q9HD45 589 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 A0A096LPI6 279 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 STK25O00506 426 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 OR1F1O43749 312 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 TSPAN9O75954 239 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 GSTM2P28161 218 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 C21orf33P30042 268 aaPredicted RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 RPS26P62854 115 aaKnown RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 MVKQ03426 396 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 CDK5R2Q13319 367 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 GRM2Q14416 872 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 NFE2L1Q14494 772 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 KIAA0319Q5VV43 1072 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 LIPKQ5VXJ0 399 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 SLC38A4Q969I6 547 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 MAGEB10Q96LZ2 347 aaPredicted RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 WACQ9BTA9 647 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 OR2AG1Q9H205 316 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 DSN1Q9H410 356 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 MAPRE3Q9UPY8 281 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 OXSR1O95747 527 aaPredicted RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 FGBP02675 491 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 CD247P20963 164 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 SDC2P34741 201 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 CLCN2P51788 898 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 TAS2R50P59544 299 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 RPS13P62277 151 aaKnown RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 ELMSAN1Q6PJG2 1045 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 RNF175Q8N4F7 328 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 TSPEARQ8WU66 669 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 L3HYPDHQ96EM0 354 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 SH3YL1Q96HL8 342 aaPredicted RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 FERD3LQ96RJ6 166 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 GPR62Q9BZJ7 368 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 SMG9Q9H0W8 520 aaKnown RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 PAQR5Q9NXK6 330 aaPredicted RBP17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 PCDHGA10Q9Y5H3 936 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 GPR45Q9Y5Y3 372 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 SPACA6W5XKT8 324 aa17.35■□□□□ 0.37
ATPAF1-214ENST00000576409 NUDT14O95848 222 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 SLC35G4P0C7Q5 338 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 EBLN1P0CF75 366 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 GGT1P19440 569 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 DNAJB7Q7Z6W7 309 aaPredicted RBP17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 TICAM1Q8IUC6 712 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 PROKR1Q8TCW9 393 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 MGLLQ99685 303 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 TUBA1CQ9BQE3 449 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 TMED9Q9BVK6 235 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 RIOK2Q9BVS4 552 aaKnown RBP17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 OSBPL10Q9BXB5 764 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 TLR4O00206 839 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 ZNF195O14628 629 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 TCEA1P23193 301 aaKnown RBP17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 MYL9P24844 172 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 AVPR1BP47901 424 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 KDELC1Q6UW63 502 aa17.34■□□□□ 0.37
ATPAF1-214ENST00000576409 CEACAM20Q6UY09 585 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms