RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 LTA4HP09960 611 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 FGF5P12034 268 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 NPPBP16860 134 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 TSPAN8P19075 237 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 CD22P20273 847 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 CRABP2P29373 138 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 BCL6P41182 706 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SLC6A12P48065 614 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SERPINB4P48594 390 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 PCBP4P57723 403 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 VSX2P58304 361 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 CYP4F2P78329 520 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 CSNK1G2P78368 415 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 ILF2Q12905 390 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 EIF3IQ13347 325 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 TAF1BQ53T94 588 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 DCAF12Q5T6F0 453 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 GKAP1Q5VSY0 366 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF425Q6IV72 752 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 RNF44Q7L0R7 432 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 ADAMTSL2Q86TH1 951 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 LCA5Q86VQ0 697 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 THOC6Q86W42 341 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 PAQR7Q86WK9 346 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 GPSM1Q86YR5 675 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 TMEM126BQ8IUX1 230 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SPACA3Q8IXA5 215 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 RNF175Q8N4F7 328 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF655Q8N720 491 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 OR6Y1Q8NGX8 325 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SNIP1Q8TAD8 396 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 RAB3IL1Q8TBN0 382 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 MAGEC3Q8TD91 643 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 MCOLN3Q8TDD5 553 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF75CPQ92670 426 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 KIAA1191Q96A73 305 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SEC16BQ96JE7 1060 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 CABS1Q96KC9 395 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 NSUN5Q96P11 429 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 FAM111AQ96PZ2 611 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 MESP1Q9BRJ9 268 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 DDA1Q9BW61 102 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 RAB11FIP5Q9BXF6 653 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SPRY4Q9C004 299 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 AICDAQ9GZX7 198 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 NSRP1Q9H0G5 558 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 RABEP2Q9H5N1 569 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SYTL2Q9HCH5 934 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 PDE7BQ9NP56 450 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 THSD1Q9NS62 852 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 FGFR1OP2Q9NVK5 253 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 IRAK4Q9NWZ3 460 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 WWOXQ9NZC7 414 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 CD274Q9NZQ7 290 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 TMEM216Q9P0N5 145 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 PILRAQ9UKJ1 303 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 ACOT9Q9Y305 439 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 TMEM184BQ9Y519 407 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 PCDHB11Q9Y5F2 797 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SCN3AQ9NY46 2000 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 H0YGG7 62 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 TMX2-CTNND1H3BSU7 103 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 EBAG9O00559 213 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 NVLO15381 856 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 BIRC5O15392 142 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 EFSO43281 561 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF749O43361 778 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 LCMT2O60294 686 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PLIN3O60664 434 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CNOT3O75175 753 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 GLRA3O75311 464 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 KLHL2O95198 593 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PROCP04070 461 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 EIF2S1P05198 315 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 GSTA1P08263 222 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ENO2P09104 434 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 LIFP15018 202 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CMPK1P30085 196 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CCR10P46092 362 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 GCGRP47871 477 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ARF3P61204 181 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ATP6V0D1P61421 351 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 TLE3Q04726 772 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PRDX1Q06830 199 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ARHGAP19Q14CB8 494 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PFKFB4Q16877 469 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 HHATQ5VTY9 493 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 FBXO42Q6P3S6 717 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CEACAM20Q6UY09 585 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 VN1R4Q7Z5H5 301 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CPLX4Q7Z7G2 160 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PPP1R3BQ86XI6 285 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 DTX1Q86Y01 620 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 KMT5CQ86Y97 462 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 MCATQ8IVS2 390 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CACNA2D3Q8IZS8 1091 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 TMEM151AQ8N4L1 468 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 RAB42Q8N4Z0 105 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms