RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PTK6Q13882 451 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 ITIH4Q14624 930 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 NDUFA9Q16795 377 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 PRTGQ2VWP7 1150 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 CATSPEREQ5SY80 951 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 ZNF585AQ6P3V2 769 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 PODNL1Q6PEZ8 512 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 PAPD4Q6PIY7 484 aaKnown RBP5.54□□□□□ -1.52
SMG6-219ENST00000575663 NPNTQ6UXI9 565 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 CAPN12Q6ZSI9 719 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 LANCL3Q6ZV70 420 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 PID1Q7Z2X4 250 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 RFX6Q8HWS3 928 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 KRTAP1-3Q8IUG1 177 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 OR4N4Q8N0Y3 316 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 LRRC75A-AS1Q8N1F1 130 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 AMER3Q8N944 861 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 LMNTD1Q8N9Z9 388 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 OR2L3Q8NG85 312 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 C16orf52Q8NHV5 167 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 MCOLN3Q8TDD5 553 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 LRRC45Q96CN5 670 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 OXNAD1Q96HP4 312 aaPredicted RBP5.54□□□□□ -1.52
SMG6-219ENST00000575663 SPATA13Q96N96 652 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 IL17FQ96PD4 163 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 LPAR4Q99677 370 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 TTYH2Q9BSA4 534 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 YIPF4Q9BSR8 244 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 CDCP1Q9H5V8 836 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 PLSCR2Q9NRY7 297 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 UTP6Q9NYH9 597 aaKnown RBP5.54□□□□□ -1.52
SMG6-219ENST00000575663 SMARCAL1Q9NZC9 954 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 STOX2Q9P2F5 926 aaPredicted RBP5.54□□□□□ -1.52
SMG6-219ENST00000575663 IMPACTQ9P2X3 320 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 TRPS1Q9UHF7 1281 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 FOXD3Q9UJU5 478 aaPredicted RBP5.54□□□□□ -1.52
SMG6-219ENST00000575663 RUVBL1Q9Y265 456 aaKnown RBP5.54□□□□□ -1.52
SMG6-219ENST00000575663 HRH3Q9Y5N1 445 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 CPAMD8Q8IZJ3 1885 aa5.54□□□□□ -1.52
SMG6-219ENST00000575663 SEC16AO15027 2179 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 DOCK10Q96BY6 2186 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 A0A0G2JNJ9 132 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 OR2A25A4D2G3 310 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 SOWAHDA6NJG2 315 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 NPIPA2E9PIF3 369 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 NPIPA3F8WFD2 350 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 H0YGG7 62 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 H0YIG0 161 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 H7C0S8 307 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 PEX1O43933 1283 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 MAN1A2O60476 641 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 SMPD2O60906 423 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 WDR1O75083 606 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 CRLF1O75462 422 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 PDE9AO76083 593 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 PROSCO94903 275 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 F12P00748 615 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 AGTP01019 485 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 KRT1P04264 644 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 CYP1A2P05177 515 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 CD53P19397 219 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 PSMB5P28074 263 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 TPP2P29144 1249 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 RFC3P40938 356 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ARHGAP25P42331 645 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ASCL1P50553 236 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 TAS2R40P59535 323 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ARF3P61204 181 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 MAT1AQ00266 395 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 PLGLB1Q02325 96 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ACTN3Q08043 901 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 WASHC5Q12768 1159 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 CBLBQ13191 982 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 SNTB1Q13884 538 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 FAM53BQ14153 422 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 DAZAP2Q15038 168 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 TMED2Q15363 201 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 DBN1Q16643 649 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 SYT16Q17RD7 645 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 GXYLT1Q4G148 440 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 EMC4Q5J8M3 183 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ITPRIPL1Q6GPH6 555 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 LRRC8BQ6P9F7 803 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 PACS1Q6VY07 963 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ANKRD37Q7Z713 158 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 RPS19BP1Q86WX3 136 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 SLC13A5Q86YT5 568 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 SULF2Q8IWU5 870 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 SLC22A15Q8IZD6 547 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ZNF567Q8N184 647 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 CYP4Z2PQ8N1L4 340 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 ZFP62Q8NB50 900 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 CFAP61Q8NHU2 1237 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 GSDMBQ8TAX9 411 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 RAPGEF5Q92565 580 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 RNASE6Q93091 150 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 RAD51AP1Q96B01 352 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 DNAJC1Q96KC8 554 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 Q96MF0 132 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 SMC6Q96SB8 1091 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms