RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 MAN1A2O60476 641 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 NEURL1O76050 574 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SUN1O94901 812 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SP1P08047 785 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 TPM1P09493 284 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PKMP14618 531 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 EZRP15311 586 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 CD46P15529 392 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 ABOP16442 354 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 GRIA1P42261 906 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 TTPAP49638 278 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 ART1P52961 327 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 RWDD2BP57060 319 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PRDX1Q06830 199 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 GBX1Q14549 363 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 MEP1AQ16819 746 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 AARS2Q5JTZ9 985 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 RNFT1Q5M7Z0 435 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PTRHD1Q6GMV3 140 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SUSD1Q6UWL2 747 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 C3P1Q6ZMU1 363 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 OTOAQ7RTW8 1153 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 GALNTL5Q7Z4T8 443 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 GHDCQ8N2G8 530 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 TAB3Q8N5C8 712 aaPredicted RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 DNAAF3Q8N9W5 541 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 TMEM178AQ8NBL3 297 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 M1APQ8TC57 530 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SKA2Q8WVK7 121 aaPredicted RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 ALG3Q92685 438 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PEX13Q92968 403 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SDCCAG3Q96C92 435 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PANX3Q96QZ0 392 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 KCNK13Q9HB14 408 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 MMP25Q9NPA2 562 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 PCDHA13Q9Y5I0 950 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SCN2AQ99250 2005 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR2W5A6NFC9 320 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 H0YIG0 161 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 MYO1CO00159 1063 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CDK2AP1O14519 115 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 PRRG2O14669 202 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CD3EAPO15446 510 aaKnown RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 P2RX6O15547 441 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CBFA2T2O43439 604 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 TSPAN12O95859 305 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 GAS8O95995 478 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CD99P14209 185 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 RPS3P23396 243 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CETN2P41208 172 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 ST13P50502 369 aaKnown RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 PRAMEP78395 509 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 HSF1Q00613 529 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 TFF3Q07654 80 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 TBX2Q13207 712 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 KLF1Q13351 362 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 ARHGAP19Q14CB8 494 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 EXT1Q16394 746 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 SLC25A25Q6KCM7 469 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 ANKRD37Q7Z713 158 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 PCGF5Q86SE9 256 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CNGA4Q8IV77 575 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 HORMAD2Q8N7B1 307 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR9A1PQ8NGU1 263 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR9A4Q8NGU2 314 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 SLC35B2Q8TB61 432 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 SMPDL3AQ92484 453 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 RERGQ96A58 199 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 FOPNLQ96NB1 174 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 OLFM1Q99784 485 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 CATSPERZQ9NTU4 200 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 COQ3Q9NZJ6 369 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 C19orf25Q9UFG5 118 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 GNPTGQ9UJJ9 305 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 ANAPC5Q9UJX4 755 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 PPT2Q9UMR5 302 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 TCAF1Q9Y4C2 921 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 HRH3Q9Y5N1 445 aa9.4□□□□□ -0.9
CALCOCO2-227ENST00000575560 GABRR3A8MPY1 467 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ARHGEF33A8MVX0 844 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 PSIP1O75475 530 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 NSA2O95478 260 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 NADKO95544 446 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ATP5DP30049 168 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 DNAJA1P31689 397 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 RPA3P35244 121 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 HSD17B2P37059 387 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 AVPR1BP47901 424 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 AGTR2P50052 363 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 PTK6Q13882 451 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 NDUFA9Q16795 377 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ANKRD20A4Q4UJ75 823 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ICE2Q659A1 982 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 PRSS41Q7RTY9 318 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 LRRC6Q86X45 466 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms