RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	TBC1D1	Q86TI0	1168 aa	Predicted RBP	9.37	□□□□□ -0.91
NXN-208	ENST00000575171	TRIM73	Q86UV7	250 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	FAM129C	Q86XR2	697 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	ADGRF3	Q8IZF5	1079 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	PLD6	Q8N2A8	252 aa	Known RBP	9.37	□□□□□ -0.91
NXN-208	ENST00000575171	FBXO39	Q8N4B4	442 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	PPFIBP2	Q8ND30	876 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	OR2L8	Q8NGY9	312 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	OR2W6P	Q8NHA6	318 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	MCOLN3	Q8TDD5	553 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	DENND1A	Q8TEH3	1009 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	DLG3	Q92796	817 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	CAVIN3	Q969G5	261 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	PPM1M	Q96MI6	270 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	MAP3K3	Q99759	626 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	CMKLR1	Q99788	373 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	SLC12A9	Q9BXP2	914 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	TRIM54	Q9BYV2	358 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	DERL2	Q9GZP9	239 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	SPHK1	Q9NYA1	384 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	UTP6	Q9NYH9	597 aa	Known RBP	9.37	□□□□□ -0.91
NXN-208	ENST00000575171	OR6C2	Q9NZP2	312 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	9.37	□□□□□ -0.91
NXN-208	ENST00000575171	EPHA6	Q9UF33	1036 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	TBK1	Q9UHD2	729 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	ZNF180	Q9UJW8	692 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	IKZF3	Q9UKT9	509 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	RAB21	Q9UL25	225 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	SATB2	Q9UPW6	733 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	PDE10A	Q9Y233	779 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171		U3KQE9	123 aa		9.37	□□□□□ -0.91
NXN-208	ENST00000575171	LRRK2	Q5S007	2527 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	CCDC187	A0A096LP49	1063 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	IQANK1	A0A1B0GTG1	560 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PMS2P1	A4D2B8	440 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	ZNF839	A8K0R7	811 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	GFY	I3L273	518 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	DNAJA2	O60884	412 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	MPO	P05164	745 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	C2	P06681	752 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	SNRPA	P09012	282 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	JMJD7	P0C870	316 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	SLC35E2B	P0CK96	405 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	HGF	P14210	728 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	CD1D	P15813	335 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	UGT2B7	P16662	529 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	CNTF	P26441	200 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	GCA	P28676	217 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PRDX3	P30048	256 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PEBP1	P30086	187 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PNLIPRP1	P54315	467 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	ATP6V0D1	P61421	351 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	GABRE	P78334	506 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	IRF9	Q00978	393 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	TRA2A	Q13595	282 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	FASTK	Q14296	549 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	TSN	Q15631	228 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PHKG1	Q16816	387 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PCSK4	Q6UW60	755 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	MBOAT1	Q6ZNC8	495 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	RAB11FIP2	Q7L804	512 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PRSS42	Q7Z5A4	293 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	CDH24	Q86UP0	819 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	SYTL1	Q8IYJ3	562 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	LINC01555	Q8NAE3	123 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	FBXO15	Q8NCQ5	510 aa	Predicted RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	KCTD4	Q8WVF5	259 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	EXT2	Q93063	718 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	GRAMD1A	Q96CP6	724 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	MED8	Q96G25	268 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	LIN37	Q96GY3	246 aa	Predicted RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PDLIM5	Q96HC4	596 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	COX4I2	Q96KJ9	171 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	TSNARE1	Q96NA8	513 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	CD180	Q99467	661 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	EGFL8	Q99944	293 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	DHRS4	Q9BTZ2	278 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	MENT	Q9BUN1	341 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	RAB33B	Q9H082	229 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	KLHL25	Q9H0H3	589 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PRORY	Q9H606	182 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PARVB	Q9HBI1	364 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	SOHLH2	Q9NX45	425 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	ARL15	Q9NXU5	204 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	PISD	Q9UG56	409 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	POMT2	Q9UKY4	750 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	ACOT9	Q9Y305	439 aa		9.36	□□□□□ -0.91
NXN-208	ENST00000575171	TDRD6	O60522	2096 aa	Known RBP	9.36	□□□□□ -0.91
NXN-208	ENST00000575171	TLDC2	A0PJX2	215 aa		9.35	□□□□□ -0.91
NXN-208	ENST00000575171	TLCD2	A6NGC4	264 aa		9.35	□□□□□ -0.91
NXN-208	ENST00000575171	NCF1B	A6NI72	391 aa	Predicted RBP	9.35	□□□□□ -0.91
NXN-208	ENST00000575171	SLC22A31	A6NKX4	558 aa		9.35	□□□□□ -0.91
NXN-208	ENST00000575171	EFCAB7	A8K855	629 aa		9.35	□□□□□ -0.91
NXN-208	ENST00000575171	NCF1C	A8MVU1	366 aa	Predicted RBP	9.35	□□□□□ -0.91
NXN-208	ENST00000575171	HGS	O14964	777 aa	Predicted RBP	9.35	□□□□□ -0.91
NXN-208	ENST00000575171	ERLIN1	O75477	346 aa		9.35	□□□□□ -0.91
NXN-208	ENST00000575171	WISP3	O95389	354 aa	Predicted RBP	9.35	□□□□□ -0.91
NXN-208	ENST00000575171	SLC16A8	O95907	504 aa		9.35	□□□□□ -0.91
NXN-208	ENST00000575171	ALDOA	P04075	364 aa	Known RBP	9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms