RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 RAD1O60671 282 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 PRAMEF4O60810 478 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 CPNE3O75131 537 aaKnown RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 DLGAP3O95886 979 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 PROCP04070 461 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 H2AFXP16104 143 aaPredicted RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 RPS15AP62244 130 aaKnown RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 REEP5Q00765 189 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 SLBPQ14493 270 aaKnown RBP eCLIP15.55■□□□□ 0.08
PFN1-203ENST00000574872 PCBP2Q15366 365 aaKnown RBP eCLIP15.55■□□□□ 0.082e-13■■■■□ 24.6
PFN1-203ENST00000574872 XKR6Q5GH73 641 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 PRAMEF9Q5VWM5 478 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 SLCO4C1Q6ZQN7 724 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 TIPARPQ7Z3E1 657 aaKnown RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 CSNK1A1LQ8N752 337 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 BANPQ8N9N5 519 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 CCDC63Q8NA47 563 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 SLC38A9Q8NBW4 561 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 SNIP1Q8TAD8 396 aaKnown RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 RERGQ96A58 199 aaPredicted RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 CLIP3Q96DZ5 547 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 SMC6Q96SB8 1091 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 RUFY1Q96T51 708 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 MACROD1Q9BQ69 325 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 IQCGQ9H095 443 aaKnown RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 GPRC5BQ9NZH0 403 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 ACSL6Q9UKU0 697 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 GRID1Q9ULK0 1009 aa15.55■□□□□ 0.08
PFN1-203ENST00000574872 TMEM184BQ9Y519 407 aaPredicted RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 TNPO3Q9Y5L0 923 aaKnown RBP15.55■□□□□ 0.08
PFN1-203ENST00000574872 TMEM8BA6NDV4 472 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 STX16-NPEPL1H3BU86 382 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 TAF4O00268 1085 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 STX16O14662 325 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 PLIN3O60664 434 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 SRPX2O60687 465 aaPredicted RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 C1GALT1C1LP0DN25 315 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 EPB42P16452 691 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 GTF2H2Q13888 395 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 RBBP5Q15291 538 aaKnown RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 HKDC1Q2TB90 917 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 TCTE1Q5JU00 501 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 C1orf189Q5VU69 101 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 ATG9BQ674R7 924 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 GTF2H2CQ6P1K8 395 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 C6orf15Q6UXA7 325 aaPredicted RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 RPS27LQ71UM5 84 aaKnown RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 GOLGA7Q7Z5G4 137 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 VN1R4Q7Z5H5 301 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 PROSER1Q86XN7 944 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 TTC29Q8NA56 475 aaPredicted RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 ZNF248Q8NDW4 579 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 OR4K1Q8NGD4 311 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 KCNE4Q8WWG9 221 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 ZNF285Q96NJ3 590 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 NSUN5Q96P11 429 aaKnown RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 AIF1LQ9BQI0 150 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 NDC1Q9BTX1 674 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 SPRY4Q9C004 299 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 GEMIN8Q9NWZ8 242 aaKnown RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 DHCR7Q9UBM7 475 aaKnown RBP15.54■□□□□ 0.08
PFN1-203ENST00000574872 PCDHB3Q9Y5E6 796 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 PCDHGA4Q9Y5G9 962 aa15.54■□□□□ 0.08
PFN1-203ENST00000574872 MDC1Q14676 2089 aaKnown RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 TRBC2A0A5B9 178 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 E2F3O00716 465 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 H2AFYO75367 372 aaKnown RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 SERPIND1P05546 499 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 MYZAPP0CAP1 466 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 MYL2P10916 166 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 LIPCP11150 499 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 ATP5F1P24539 256 aaPredicted RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 ARL1P40616 181 aaPredicted RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 CYP4F2P78329 520 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 IRF8Q02556 426 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 RELAQ04206 551 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 GPS2Q13227 327 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 CHIT1Q13231 466 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 CLN3Q13286 438 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 DOC2AQ14183 400 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 GRM7Q14831 915 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 CCDC153Q494R4 210 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 ZYG11AQ6WRX3 759 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 CROCCP2Q86T23 111 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 VASH2Q86V25 355 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 MYLK4Q86YV6 388 aaPredicted RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 CACNA2D3Q8IZS8 1091 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 NLGN4XQ8N0W4 816 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 DTWD1Q8N5C7 304 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 METTL27Q8N6F8 245 aaPredicted RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 MFSD9Q8NBP5 474 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 ARMC2Q8NEN0 867 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 NLGN4YQ8NFZ3 816 aaPredicted RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 MOCOSQ96EN8 888 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 TMEM237Q96Q45 408 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 CAPS2Q9BXY5 557 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 AKIRIN1Q9H9L7 192 aaPredicted RBP15.53■□□□□ 0.08
PFN1-203ENST00000574872 MKS1Q9NXB0 559 aa15.53■□□□□ 0.08
PFN1-203ENST00000574872 SLC17A7Q9P2U7 560 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms