RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TRIM73Q86UV7 250 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 LINC01555Q8NAE3 123 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 HMGCLL1Q8TB92 370 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 ADAMTS17Q8TE56 1095 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 C10orf82Q8WW14 230 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 THAP4Q8WY91 577 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 SCYL1Q96KG9 808 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 TUBB6Q9BUF5 446 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 RAB11FIP5Q9BXF6 653 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 CHST8Q9H2A9 424 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 C12orf65Q9H3J6 166 aaKnown RBP10.18□□□□□ -0.78
LITAF-216ENST00000574848 CAB39LQ9H9S4 337 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 FAM60AQ9NP50 221 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 FBXO6Q9NRD1 293 aaPredicted RBP10.18□□□□□ -0.78
LITAF-216ENST00000574848 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 TMEM216Q9P0N5 145 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 COMMD10Q9Y6G5 202 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 H0YHG0 523 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 H3BMM5 538 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 KATNA1O75449 491 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 NDUFS3O75489 264 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 HAUS5O94927 633 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 FKBP9O95302 570 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 S1PR4O95977 384 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 ESR1P03372 595 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 KLK3P07288 261 aaPredicted RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 RBP1P09455 135 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SLC35E2BP0CK96 405 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 CD9P21926 228 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SERPINB5P36952 375 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SKIV2L2P42285 1042 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 GCGRP47871 477 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 CSRP3P50461 194 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 RASSF2P50749 326 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 RPS15P62841 145 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 OCRLQ01968 901 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 HECTD2Q5U5R9 776 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 PRAMEF17Q5VTA0 474 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 PTRHD1Q6GMV3 140 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 RHBDD2Q6NTF9 364 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 TCTN3Q6NUS6 607 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 ZYG11AQ6WRX3 759 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 PRICKLE2Q7Z3G6 844 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SYTL1Q8IYJ3 562 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 OR2L8Q8NGY9 312 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 PROKR1Q8TCW9 393 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 MR1Q95460 341 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SLC22A18Q96BI1 424 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 ABHD17AQ96GS6 310 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 MRPL57Q9BQC6 102 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 MECRQ9BV79 373 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 NLNQ9BYT8 704 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 KLHL25Q9H0H3 589 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 MRPL46Q9H2W6 279 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 GPAMQ9HCL2 828 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SERTAD3Q9UJW9 196 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 ANAPC2Q9UJX6 822 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 EMCNQ9ULC0 261 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 PLAGL1Q9UM63 463 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 SRPK3Q9UPE1 567 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 FARSAQ9Y285 508 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 MAN2B2Q9Y2E5 1009 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 TDRKHQ9Y2W6 561 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 KLK4Q9Y5K2 254 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 AP1M2Q9Y6Q5 423 aa10.17□□□□□ -0.78
LITAF-216ENST00000574848 ASH1LQ9NR48 2969 aaKnown RBP10.17□□□□□ -0.78
LITAF-216ENST00000574848 A0A0G2JND7 137 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 CCDC189A1A4V9 331 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 CDC14CA4D256 554 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 CFAP73A6NFT4 308 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 MKRN2OSH3BPM6 223 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 MYO1CO00159 1063 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 PHGDHO43175 533 aaKnown RBP10.16□□□□□ -0.78
LITAF-216ENST00000574848 ZNF749O43361 778 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 HCRTR1O43613 425 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 PRICKLE3O43900 615 aaPredicted RBP10.16□□□□□ -0.78
LITAF-216ENST00000574848 TRIM13O60858 407 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 C1orf105O95561 183 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 HSPA4LO95757 839 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 LTA4HP09960 611 aaKnown RBP10.16□□□□□ -0.78
LITAF-216ENST00000574848 ERGP11308 486 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 GABRB3P28472 473 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 SLC1A6P48664 564 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 ABCE1P61221 599 aaKnown RBP10.16□□□□□ -0.78
LITAF-216ENST00000574848 RPS18P62269 152 aaKnown RBP10.16□□□□□ -0.78
LITAF-216ENST00000574848 NFKB2Q00653 900 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 ACTN3Q08043 901 aaPredicted RBP10.16□□□□□ -0.78
LITAF-216ENST00000574848 ACAP2Q15057 778 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 NCF4Q15080 339 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 TBCCQ15814 346 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 LIPMQ5VYY2 423 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 LCN10Q6JVE6 187 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 LRRC8EQ6NSJ5 796 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 CNSTQ6PJW8 725 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 SLC22A9Q8IVM8 553 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 C10orf107Q8IVU9 208 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 GPR135Q8IZ08 494 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 DNAJC22Q8N4W6 341 aa10.16□□□□□ -0.78
LITAF-216ENST00000574848 AFAP1L2Q8N4X5 818 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms