RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 AIREO43918 545 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 ZNF821O75541 412 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-206ENST00000573852 NTRK1P04629 796 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 HIST1H2AGP0C0S8 130 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-206ENST00000573852 LAMP1P11279 417 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 HIST1H2ADP20671 130 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 SLC19A1P41440 591 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 KCNJ10P78508 379 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 ABRQ12979 859 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 SELENBP1Q13228 472 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 CHIT1Q13231 466 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 COLEC12Q5KU26 742 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 FAM124AQ86V42 546 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 LYSMD2Q8IV50 215 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 ADAMTS19Q8TE59 1207 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 HIST1H2AHQ96KK5 128 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 HIST1H2AJQ99878 128 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 H2AFJQ9BTM1 129 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 EPS8L2Q9H6S3 715 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 TPT1P8Q9HAU6 139 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 GREM1O60565 184 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 UPK1BO75841 260 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 ACPPP15309 386 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 GADD45AP24522 165 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 AQP1P29972 269 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 TAF12Q16514 161 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 ZNF404Q494X3 552 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 RETSATQ6NUM9 610 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 TCAIMQ8N3R3 496 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 CPA6Q8N4T0 437 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 MAL2Q969L2 176 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 C2orf49Q9BVC5 232 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-206ENST00000573852 BBS2Q9BXC9 721 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 DNAJC11Q9NVH1 559 aa18.44■□□□□ 0.54
SCARF1-206ENST00000573852 PABPN1LA6NDY0 278 aaKnown RBP18.43■□□□□ 0.54
SCARF1-206ENST00000573852 METTL15A6NJ78 407 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 TMEM229AB2RXF0 380 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 SOCS5O75159 536 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 CD22P20273 847 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 CAP1Q01518 475 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 DGKKQ5KSL6 1271 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 LRRC66Q68CR7 880 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 TMEM53Q6P2H8 277 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 TSEN54Q7Z6J9 526 aaKnown RBP18.43■□□□□ 0.54
SCARF1-206ENST00000573852 P3H2Q8IVL5 708 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 OR8J2Q8NGG1 315 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 HTRA1Q92743 480 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 VOPP1Q96AW1 172 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 SH3KBP1Q96B97 665 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 EPYCQ99645 322 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 GABARAPL3Q9BY60 117 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 KLHL42Q9P2K6 505 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 CLEC4EQ9ULY5 219 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 PCDHB11Q9Y5F2 797 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 GFRA2O00451 464 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 C8GP07360 202 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 RRM2P31350 389 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 VEZF1Q14119 521 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 GPNMBQ14956 572 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 KCNJ8Q15842 424 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 LACC1Q8IV20 430 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 MTERF1Q99551 399 aaKnown RBP18.43■□□□□ 0.54
SCARF1-206ENST00000573852 MMP27Q9H306 513 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 ANKHQ9HCJ1 492 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 FAM120CQ9NX05 1096 aaKnown RBP18.43■□□□□ 0.54
SCARF1-206ENST00000573852 PSORS1C1Q9UIG5 152 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 LRFN2Q9ULH4 789 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 FZD4Q9ULV1 537 aa18.43■□□□□ 0.54
SCARF1-206ENST00000573852 SERTM1A2A2V5 107 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TMEM88BA6NKF7 163 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TBKBP1A7MCY6 615 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 RFPL2O75678 378 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 PABPC1P11940 636 aaKnown RBP18.42■□□□□ 0.54
SCARF1-206ENST00000573852 JUPP14923 745 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 GRK5P34947 590 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 UGT2B10P36537 528 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 HNMTP50135 292 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TPTEP56180 551 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TUBA1BP68363 451 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 CDC20Q12834 499 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TUBA1AQ71U36 451 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 ASIC4Q96FT7 647 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 CHST8Q9H2A9 424 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TMPRSS11EQ9UL52 423 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TBX1O43435 398 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 GSTT2P0CG29 244 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 GSTT2BP0CG30 244 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 DBTP11182 482 aaKnown RBP18.42■□□□□ 0.54
SCARF1-206ENST00000573852 SEPHS1P49903 392 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 PFN3P60673 137 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 PTSQ03393 145 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TIGD6Q17RP2 521 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 RNF180Q86T96 592 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TMEM150AQ86TG1 271 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 CCDC103Q8IW40 242 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 TET1Q8NFU7 2136 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 VN1R3Q9BXE9 311 aa18.42■□□□□ 0.54
SCARF1-206ENST00000573852 C6orf62Q9GZU0 229 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-206ENST00000573852 RUBCNLQ9H714 662 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms