RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MSS51Q4VC12 460 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 HIVEP3Q5T1R4 2406 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 GARNL3Q5VVW2 1013 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 PAQR3Q6TCH7 311 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 LINC00696Q6ZRV3 163 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 KIAA0408Q6ZU52 694 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 C17orf64Q86WR6 236 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 CISD2Q8N5K1 135 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 PRR7Q8TB68 274 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ZCCHC10Q8TBK6 192 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 SNRNP40Q96DI7 357 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 C19orf60Q96EN9 201 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 HIST1H2AHQ96KK5 128 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 CCDC138Q96M89 665 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 OR2A5Q96R48 311 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 NAPGQ99747 312 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 HIST1H2AJQ99878 128 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 TRIM51Q9BSJ1 452 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 H2AFJQ9BTM1 129 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ATG10Q9H0Y0 220 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ZBTB20Q9HC78 741 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 MKKSQ9NPJ1 570 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ENAMQ9NRM1 1142 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ADAMTS6Q9UKP5 1117 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 PDE10AQ9Y233 779 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ICE1Q9Y2F5 2266 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CLEC18AA5D8T8 446 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 TCP11X1B4DZS4 312 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CDH1P12830 882 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SAT1P21673 171 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CCND1P24385 295 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 HRH2P25021 359 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 ITGA8P53708 1063 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CDKN2DP55273 166 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 ARL4CP56559 192 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 IL2P60568 153 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 MAT1AQ00266 395 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 NAE1Q13564 534 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SYT16Q17RD7 645 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 EIF2S3LQ2VIR3 472 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 FAM45BPQ6NSW5 357 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 AGTRAPQ6RW13 159 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 IGFL3Q6UXB1 125 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SYDE1Q6ZW31 735 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 ANKMY2Q8IV38 441 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CNTN4Q8IWV2 1026 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 KBTBD2Q8IY47 623 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 LRRC56Q8IYG6 542 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CLEC18CQ8NCF0 446 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 DNAJB14Q8TBM8 379 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 FAM45AQ8TCE6 357 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 PPP4R1Q8TF05 950 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SLCO2A1Q92959 643 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SNF8Q96H20 258 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 PWWP2AQ96N64 755 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 MESP1Q9BRJ9 268 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 TRIM54Q9BYV2 358 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 PCBD2Q9H0N5 130 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SYNPO2LQ9H987 977 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 PARVBQ9HBI1 364 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 TMEM184CQ9NVA4 438 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 ASF1BQ9NVP2 202 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 ARL15Q9NXU5 204 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 ZFATQ9P243 1243 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CORO1CQ9ULV4 474 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 NOVA2Q9UNW9 492 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 CSAG2Q9Y5P2 127 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 COPG1Q9Y678 874 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SAR1BQ9Y6B6 198 aa9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 SPTAN1Q13813 2472 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 USP9YO00507 2555 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-212ENST00000573328 NAV2Q8IVL1 2488 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 MAST4O15021 2626 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 IGLV3-12A0A075B6K2 115 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 FEZF1A0PJY2 475 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 CYSRT1A8MQ03 144 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 EFCAB8A8MWE9 144 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 CCDC188H7C350 402 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 SLC16A5O15375 505 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 TTI1O43156 1089 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 FOXS1O43638 330 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 GUCA1CO95843 209 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 AHSGP02765 367 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 SLC35G6P0C7Q6 338 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 COX6A1P12074 109 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 GP1BBP13224 206 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 IL1RNP18510 177 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 SLC26A3P40879 764 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 PGGT1BP53609 377 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 ARG2P78540 354 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 Q0VFX4 171 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 CDC16Q13042 620 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 PHKG1Q16816 387 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 MINDY4Q4G0A6 757 aa9.16□□□□□ -0.94
NPLOC4-212ENST00000573328 HECTD2Q5U5R9 776 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms