RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 DSG2Q14126 1118 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 PPP1R3AQ16821 1122 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 MUM1Q2TAK8 710 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 VWA2Q5GFL6 755 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 ATG9BQ674R7 924 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 PRMT9Q6P2P2 845 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 IGFL2Q6UWQ7 119 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 CYS1Q717R9 158 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 HPS6Q86YV9 775 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 ANKMY2Q8IV38 441 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 ANKRD7Q92527 254 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 PNPLA2Q96AD5 504 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 MVB12AQ96EY5 273 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 LINGO1Q96FE5 620 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 PRAP1Q96NZ9 151 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 OR4K3Q96R72 315 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 NSMCE4AQ9NXX6 385 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 GRHL1Q9NZI5 618 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 KCNE1BA0A087WTH5 132 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 DPM1O60762 260 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 CCND1P24385 295 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 AP1S2P56377 157 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 CALCOCO2Q13137 446 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
SMG6-212ENST00000573153 GARNL3Q5VVW2 1013 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 PRAMEF13Q5VWM6 474 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 AGTRAPQ6RW13 159 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 SBSNQ6UWP8 590 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 SYT10Q6XYQ8 523 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 PRSS41Q7RTY9 318 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 ZC3HC1Q86WB0 502 aaKnown RBP16.45■□□□□ 0.22
SMG6-212ENST00000573153 PALM2Q8IXS6 379 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 ZBED8Q8IZ13 594 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 GPATCH11Q8N954 259 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 OR56A3Q8NH54 315 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 TM4SF19Q96DZ7 209 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 MFRPQ9BY79 579 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 CCDC177Q9NQR7 707 aaPredicted RBP16.45■□□□□ 0.22
SMG6-212ENST00000573153 SEMA3GQ9NS98 782 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 TMEM184CQ9NVA4 438 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 CDC23Q9UJX2 597 aa16.45■□□□□ 0.22
SMG6-212ENST00000573153 LRRK2Q5S007 2527 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 PEX12O00623 359 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 TXNDC9O14530 226 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 LCMT2O60294 686 aaKnown RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 STATHP02808 62 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 ENO2P09104 434 aaPredicted RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 ZNF37AP17032 561 aaPredicted RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 C2orf54Q08AI8 447 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 TSTA3Q13630 321 aaPredicted RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 INPP5JQ15735 1006 aaPredicted RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 SYT16Q17RD7 645 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 PLEKHN1Q494U1 663 aaPredicted RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 ZC3H7AQ8IWR0 971 aaKnown RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 CLEC1AQ8NC01 280 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 CPT1CQ8TCG5 803 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 BARD1Q99728 777 aaKnown RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 MACROD1Q9BQ69 325 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 SARGQ9BW04 601 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 TGIF2Q9GZN2 237 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 ATG10Q9H0Y0 220 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 SPNS1Q9H2V7 528 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 ZNF282Q9UDV7 671 aaPredicted RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 NOVA2Q9UNW9 492 aaKnown RBP16.44■□□□□ 0.22
SMG6-212ENST00000573153 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
SMG6-212ENST00000573153 A0A0A6YYC8 382 aaPredicted RBP16.43■□□□□ 0.22
SMG6-212ENST00000573153 CTAGE15A4D2H0 777 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 I3L1I5 382 aaPredicted RBP16.43■□□□□ 0.22
SMG6-212ENST00000573153 PIAS1O75925 651 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 GSTA2P09210 222 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 COX6A1P12074 109 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 NPPBP16860 134 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 FBLP22087 321 aaKnown RBP16.43■□□□□ 0.22
SMG6-212ENST00000573153 BCL6P41182 706 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 MAT1AQ00266 395 aaKnown RBP16.43■□□□□ 0.22
SMG6-212ENST00000573153 CAV1Q03135 178 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 AIMP2Q13155 320 aaKnown RBP16.43■□□□□ 0.22
SMG6-212ENST00000573153 FAM53BQ14153 422 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 ZNF460Q14592 562 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 TMEM214Q6NUQ4 689 aaKnown RBP16.43■□□□□ 0.22
SMG6-212ENST00000573153 LCTLQ6UWM7 567 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 Q6ZS92 163 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 STRA8Q7Z7C7 330 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 CTAGE6Q86UF2 777 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 PYROXD1Q8WU10 500 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 PSMF1Q92530 271 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 COL26A1Q96A83 441 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 C8orf44Q96CB5 159 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 THAP11Q96EK4 314 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 CABS1Q96KC9 395 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 CRB3Q9BUF7 120 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 RAB17Q9H0T7 212 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 RHOJQ9H4E5 214 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 POPDC3Q9HBV1 291 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 ATP13A2Q9NQ11 1180 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 ABCF3Q9NUQ8 709 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 NTNG1Q9Y2I2 539 aa16.43■□□□□ 0.22
SMG6-212ENST00000573153 LOC102723996A0A087X1L8 192 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 TTLL8A6PVC2 850 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 HIST1H2AGP0C0S8 130 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms