RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SNX7Q9UNH6 387 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 SSUH2Q9Y2M2 353 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 ASB1Q9Y576 335 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 IQANK1A0A1B0GTG1 560 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 H0YGG7 62 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 RFPL1O75677 317 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 WISP1O95388 367 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 MT-ND3P03897 115 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 DLSTP36957 453 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 HSPA7P48741 367 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 ARF3P61204 181 aaPredicted RBP15.11■□□□□ 0.01
CHD3-215ENST00000572750 CXADRP78310 365 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 CSNK1G2P78368 415 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 TECRLQ5HYJ1 363 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 CATSPEREQ5SY80 951 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 LGSNQ5TDP6 509 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 FBXO42Q6P3S6 717 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 TLDC1Q6P9B6 456 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 DSELQ8IZU8 1212 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 TCAIMQ8N3R3 496 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 OR2W6PQ8NHA6 318 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 MZB1Q8WU39 189 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 SLC5A11Q8WWX8 675 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 MR1Q95460 341 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 CAVIN3Q969G5 261 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 MTBPQ96DY7 904 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 RUFY1Q96T51 708 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 CCDC77Q9BR77 488 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 NDC1Q9BTX1 674 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 GPN2Q9H9Y4 310 aaPredicted RBP15.11■□□□□ 0.01
CHD3-215ENST00000572750 TMEM184CQ9NVA4 438 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 SRPK3Q9UPE1 567 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 DYRK1BQ9Y463 629 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 AP1M2Q9Y6Q5 423 aa15.11■□□□□ 0.01
CHD3-215ENST00000572750 FEZF1A0PJY2 475 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 FOXO6A8MYZ6 492 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 GOLGA8RI6L899 631 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 MEN1O00255 615 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 P2RX6O15547 441 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 EFSO43281 561 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 CCNYL3P0C7X3 344 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 MTHFD2P13995 350 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 F8A1P23610 371 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 BCL6P41182 706 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 GCGRP47871 477 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 AGTR2P50052 363 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 CCR8P51685 355 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 UCNP55089 124 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 SLC9A5Q14940 896 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 ACAP2Q15057 778 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 HKDC1Q2TB90 917 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 WASHC2DQ5SRD0 308 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 ZNF385CQ66K41 422 aaPredicted RBP15.1■□□□□ 0.01
CHD3-215ENST00000572750 SULT1C3Q6IMI6 304 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 LCN10Q6JVE6 187 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 RHBDD2Q6NTF9 364 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 FAM198BQ6UWH4 519 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 CCDC81Q6ZN84 652 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 KLHDC8AQ8IYD2 350 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 DTWD1Q8N5C7 304 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 METTL27Q8N6F8 245 aaPredicted RBP15.1■□□□□ 0.01
CHD3-215ENST00000572750 CSNK1A1LQ8N752 337 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 RHEBL1Q8TAI7 183 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 KIAA1143Q96AT1 154 aaPredicted RBP15.1■□□□□ 0.01
CHD3-215ENST00000572750 LRFN5Q96NI6 719 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 OR2A5Q96R48 311 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 CHST8Q9H2A9 424 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 SPNS1Q9H2V7 528 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 CNOT10Q9H9A5 744 aaKnown RBP15.1■□□□□ 0.01
CHD3-215ENST00000572750 TXLNGQ9NUQ3 528 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 XPR1Q9UBH6 696 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 IL17BQ9UHF5 180 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 RAB21Q9UL25 225 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 PADI1Q9ULC6 663 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 PCDHGA4Q9Y5G9 962 aa15.1■□□□□ 0.01
CHD3-215ENST00000572750 MRPS18BQ9Y676 258 aaKnown RBP15.1■□□□□ 0.01
CHD3-215ENST00000572750 SYCE1LA8MT33 242 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 B8ZZF3 427 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 TERTO14746 1132 aaKnown RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 SRPX2O60687 465 aaPredicted RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 IPO13O94829 963 aaKnown RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 MED26O95402 600 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 HBQ1P09105 142 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 GFAPP14136 432 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 HRH2P25021 359 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 GGT5P36269 586 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 RPS15AP62244 130 aaKnown RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 CDC16Q13042 620 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 DNASE1L3Q13609 305 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 GRM7Q14831 915 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 TSNAXIP1Q2TAA8 658 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 CDKL4Q5MAI5 379 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 ARHGAP40Q5TG30 622 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 TIFABQ6ZNK6 161 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 TTLL10Q6ZVT0 673 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 VN1R4Q7Z5H5 301 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 SNX31Q8N9S9 440 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 TTC29Q8NA56 475 aaPredicted RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 ABHD11Q8NFV4 315 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms