RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 PLCXD1Q9NUJ7 323 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 CCDC59Q9P031 241 aaKnown RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PSORS1C1Q9UIG5 152 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF232Q9UNY5 417 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 RBMX2Q9Y388 322 aaKnown RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 TESMINQ9Y4I5 508 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PCDHB11Q9Y5F2 797 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 IGSF6O95976 241 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 RRM2P31350 389 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 HNF1BP35680 557 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 GGT2P36268 569 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 CSKP41240 450 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 TIMM50Q3ZCQ8 353 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 RTP2Q5QGT7 225 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 RSPO2Q6UXX9 243 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 TPGS1Q6ZTW0 290 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 CCDC80Q76M96 950 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 HEATR4Q86WZ0 1026 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 ADGRG2Q8IZP9 1017 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 UBE2FQ969M7 185 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 DPH2Q9BQC3 489 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 SLC12A9Q9BXP2 914 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 DUSP12Q9UNI6 340 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 CLCA1A8K7I4 914 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 A8MX80 341 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CA12O43570 354 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ADAMTS4O75173 837 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 VNN2O95498 520 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SEMG1P04279 462 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 KRT8P05787 483 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CKBP12277 381 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ANXA8P13928 327 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ITPKAP23677 461 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SERPINA4P29622 427 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 PRKCDQ05655 676 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 DDX39BQ13838 428 aaKnown RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 TEAD4Q15561 434 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ANXA8L1Q5VT79 327 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 STEAP3Q658P3 488 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF551Q7Z340 670 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 C11orf65Q8NCR3 313 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CRELD1Q96HD1 420 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CTRCQ99895 268 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 BTBD2Q9BX70 525 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 FZD4Q9ULV1 537 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 PCDHGA6Q9Y5G7 932 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 NPIPB8E9PQR5 432 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SOCS5O75159 536 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 VIPP01282 170 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 IGHA2P01877 340 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CDK1P06493 297 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 TGFBR1P36897 503 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SLC11A1P49279 550 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 PRSS55Q6UWB4 352 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ANGPTL8Q6UXH0 198 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SLC46A3Q7Z3Q1 461 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 PTOV1Q86YD1 416 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 OR10G2Q8NGC3 310 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF675Q8TD23 568 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 DUSP26Q9BV47 211 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 VPS29Q9UBQ0 182 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 VPS4AQ9UN37 437 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 POFUT2Q9Y2G5 429 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 KCNE1BA0A087WTH5 132 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ASMTP46597 345 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 AP1S2P56377 157 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF33BQ06732 778 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SP140Q13342 867 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 DMC1Q14565 340 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CARTPTQ16568 116 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CPTPQ5TA50 214 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ARMCX6Q7L4S7 300 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SAPCD2Q86UD0 394 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 DNAJC22Q8N4W6 341 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 FBXO22Q8NEZ5 403 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 C9orf43Q8TAL5 461 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 UTP15Q8TED0 518 aaKnown RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 LINC01599Q8WXQ3 324 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 EHD1Q9H4M9 534 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 ENOPH1Q9UHY7 261 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 MKLN1Q9UL63 735 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SLC22A14Q9Y267 594 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 DYRK3O43781 588 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 JUPP14923 745 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 EPORP19235 508 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 C21orf33P30042 268 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 CA5AP35218 305 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 UGT8Q16880 541 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 RSBN1Q5VWQ0 802 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SLC22A15Q8IZD6 547 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 OR8J2Q8NGG1 315 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 SIGLEC11Q96RL6 698 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 DOHHQ9BU89 302 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 NUAK2Q9H093 628 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
CCDC40-207ENST00000572253 LOC110117498-PIK3R3F6TDL0 507 aa10.4□□□□□ -0.74
CCDC40-207ENST00000572253 K7ERQ8 282 aa10.4□□□□□ -0.74
CCDC40-207ENST00000572253 HSMCR30P0CW71 290 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms