RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ECHS1P30084 290 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 AP1S2P56377 157 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 SNRPNP63162 240 aaKnown RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 USP10Q14694 798 aaKnown RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 SSPNQ14714 243 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 SLMAPQ14BN4 828 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 NKG7Q16617 165 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 MUM1Q2TAK8 710 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 TCTN3Q6NUS6 607 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 ASB18Q6ZVZ8 466 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 PPP1R32Q7Z5V6 425 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 ANKRD49Q8WVL7 239 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 RERGQ96A58 199 aaPredicted RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 COL26A1Q96A83 441 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 CYTH2Q99418 400 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 SPSB2Q99619 263 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 SGPP1Q9BX95 441 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 UNKQ9C0B0 810 aaKnown RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 SOX17Q9H6I2 414 aaPredicted RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 GPAMQ9HCL2 828 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 NINJ2Q9NZG7 142 aa13.87□□□□□ -0.19
LITAF-208ENST00000571627 NOVA2Q9UNW9 492 aaKnown RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 MTO1Q9Y2Z2 717 aaKnown RBP13.87□□□□□ -0.19
LITAF-208ENST00000571627 MYO18BQ8IUG5 2567 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 ONECUT2O95948 504 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 CD63P08962 238 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 RHOXF2BP0C7M4 288 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 PIM1P11309 404 aaPredicted RBP13.86□□□□□ -0.19
LITAF-208ENST00000571627 STMN1P16949 149 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 RAPSNQ13702 412 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 PPP1R3AQ16821 1122 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 ATG14Q6ZNE5 492 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 C17orf64Q86WR6 236 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 PRSS58Q8IYP2 241 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 PTERQ96BW5 349 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 RHOXF2Q9BQY4 288 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 SLC25A23Q9BV35 468 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 FUT8Q9BYC5 575 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 PCBD2Q9H0N5 130 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 CDC42EP4Q9H3Q1 356 aaKnown RBP13.86□□□□□ -0.19
LITAF-208ENST00000571627 ZNF304Q9HCX3 659 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 TMEM184CQ9NVA4 438 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 P4HTMQ9NXG6 502 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 MRPS2Q9Y399 296 aaKnown RBP13.86□□□□□ -0.19
LITAF-208ENST00000571627 DOCK10Q96BY6 2186 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 NBASA2RRP1 2371 aa13.86□□□□□ -0.19
LITAF-208ENST00000571627 PRRC2CQ9Y520 2896 aaKnown RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 FEZF1A0PJY2 475 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 PHGDHO43175 533 aaKnown RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 ALOX12BO75342 701 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 FAM155BO75949 473 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 ALBP02768 609 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 FBLP22087 321 aaKnown RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 CCND1P24385 295 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 PGDP52209 483 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 RRADP55042 308 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 CSNK1G2P78368 415 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 MEF2AQ02078 507 aaPredicted RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 EFTUD2Q15029 972 aaKnown RBP eCLIP13.85□□□□□ -0.194e-13■□□□□ 11.1
LITAF-208ENST00000571627 CAPN13Q6MZZ7 669 aaPredicted RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 LCTLQ6UWM7 567 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 MED25Q71SY5 747 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 VN1R4Q7Z5H5 301 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 SPATA6LQ8N4H0 392 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 ARHGEF39Q8N4T4 335 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 TMEM102Q8N9M5 508 aaPredicted RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 EIF1ADQ8N9N8 165 aaKnown RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 FDCSPQ8NFU4 85 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 OR56A3Q8NH54 315 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 ATL1Q8WXF7 558 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 FBXL8Q96CD0 374 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 OR4K3Q96R72 315 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 MACROD1Q9BQ69 325 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 MESP1Q9BRJ9 268 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 NUDT9Q9BW91 350 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 EPN3Q9H201 632 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 SLC26A1Q9H2B4 701 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 ACSS3Q9H6R3 686 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 WDR54Q9H977 334 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 NFU1Q9UMS0 254 aa13.85□□□□□ -0.19
LITAF-208ENST00000571627 SPENQ96T58 3664 aaKnown RBP13.85□□□□□ -0.19
LITAF-208ENST00000571627 UBR5O95071 2799 aaPredicted RBP13.84□□□□□ -0.19
LITAF-208ENST00000571627 A0A0A6YYC8 382 aaPredicted RBP13.84□□□□□ -0.19
LITAF-208ENST00000571627 I3L1I5 382 aaPredicted RBP13.84□□□□□ -0.19
LITAF-208ENST00000571627 PEX12O00623 359 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 CEACAM4O75871 244 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 ACSL3O95573 720 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 NPPBP16860 134 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 HRH2P25021 359 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 CRABP2P29373 138 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 GMPRP36959 345 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 BCL6P41182 706 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 RAB10P61026 200 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 RPS15AP62244 130 aaKnown RBP13.84□□□□□ -0.19
LITAF-208ENST00000571627 RELAQ04206 551 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 TSNQ15631 228 aaKnown RBP13.84□□□□□ -0.19
LITAF-208ENST00000571627 ZKSCAN8Q15776 578 aaPredicted RBP13.84□□□□□ -0.19
LITAF-208ENST00000571627 DCAF10Q5QP82 559 aa13.84□□□□□ -0.19
LITAF-208ENST00000571627 PRMT9Q6P2P2 845 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms