RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FRMPD2BQ6IN97 320 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 IGF2-ASQ6U949 168 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 CEACAM20Q6UY09 585 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 RPS27LQ71UM5 84 aaKnown RBP16.03■□□□□ 0.16
COMMD4-224ENST00000568877 PPP1R3BQ86XI6 285 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 LSMEM2Q8N112 164 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 TBC1D19Q8N5T2 526 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 ZNF740Q8NDX6 193 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 OR1L3Q8NH93 324 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 PPP4R1Q8TF05 950 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 PMEPA1Q969W9 287 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 NXPE2Q96DL1 559 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 THAP11Q96EK4 314 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 PTCD3Q96EY7 689 aaKnown RBP16.03■□□□□ 0.16
COMMD4-224ENST00000568877 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
COMMD4-224ENST00000568877 OR2A5Q96R48 311 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 SELENOSQ9BQE4 189 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 ZPBPQ9BS86 351 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 SARGQ9BW04 601 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 ASPSCR1Q9BZE9 553 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 B3GNT4Q9C0J1 378 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 SPNS1Q9H2V7 528 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 ZBTB26Q9HCK0 441 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 ACSS2Q9NR19 701 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 GEMIN8Q9NWZ8 242 aaKnown RBP16.03■□□□□ 0.16
COMMD4-224ENST00000568877 ANGPTL2Q9UKU9 493 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 B3GALT1Q9Y5Z6 326 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 AK5Q9Y6K8 562 aa16.03■□□□□ 0.16
COMMD4-224ENST00000568877 PCM1Q15154 2024 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ADAMTS20P59510 1910 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 KCNE1BA0A087WTH5 132 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 LOC105369274A0A096LPK9 316 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 LOC102723532A0A0G2JNH3 316 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 TMEM120BA0PK00 339 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 C9orf172C9J069 976 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 H0YGG7 62 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 H3BMH7 237 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ATP8B1O43520 1251 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 OR1F1O43749 312 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 LCMT2O60294 686 aaKnown RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 TRIM13O60858 407 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 DXOO77932 396 aaKnown RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 BPGMP07738 259 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 CTSBP07858 339 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 BCL6P41182 706 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 SERPINB4P48594 390 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 SLC18A1P54219 525 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 NAGLUP54802 743 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ITGA1P56199 1179 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ARF3P61204 181 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 NAA20P61599 178 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 CLCQ05315 142 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 LAPTM5Q13571 262 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 E2F2Q14209 437 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 SLBPQ14493 270 aaKnown RBP eCLIP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 GPR135Q8IZ08 494 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 OR4N4Q8N0Y3 316 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 KRT78Q8N1N4 520 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 CCNYL1Q8N7R7 359 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 MFSD9Q8NBP5 474 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 TRPC4APQ8TEL6 797 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ATP6V1E2Q96A05 226 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 RERGQ96A58 199 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 MOCOSQ96EN8 888 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ZNF285Q96NJ3 590 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 EFCAB11Q9BUY7 163 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 MECRQ9BV79 373 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 SPRTNQ9H040 489 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 NT5DC2Q9H857 520 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 ACTR8Q9H981 624 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 SYNPO2LQ9H987 977 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 SEMA4BQ9NPR2 832 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-224ENST00000568877 PCDHGA4Q9Y5G9 962 aa16.02■□□□□ 0.16
COMMD4-224ENST00000568877 CDRT15L2A8MXV6 281 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 NVLO15381 856 aaKnown RBP16.01■□□□□ 0.15
COMMD4-224ENST00000568877 BRINP1O60477 761 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 UGDHO60701 494 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 OR2B3O76000 313 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 DHRS4L1P0CG22 281 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 TSPAN8P19075 237 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 CD22P20273 847 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 SCTRP47872 440 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 CCNG1P51959 295 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 VSX2P58304 361 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-224ENST00000568877 ASPHQ12797 758 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 RBBP5Q15291 538 aaKnown RBP16.01■□□□□ 0.15
COMMD4-224ENST00000568877 RBBP7Q16576 425 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 PAGE2BQ5JRK9 111 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 TCTE1Q5JU00 501 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 CFAP157Q5JU67 520 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 LIPJQ5W064 366 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 PWWP2BQ6NUJ5 590 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 TMIGD1Q6UXZ0 262 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 ANKRD42Q8N9B4 389 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 OR52B6Q8NGF0 335 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 NTMT1Q9BV86 223 aa16.01■□□□□ 0.15
COMMD4-224ENST00000568877 PITHD1Q9GZP4 211 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms