RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 GLT6D1Q7Z4J2 308 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 ZNF438Q7Z4V0 828 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 DHFR2Q86XF0 187 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 PHYKPLQ8IUZ5 450 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 HOMEZQ8IX15 550 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 ANKFN1Q8N957 763 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 EME1Q96AY2 570 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 VPS35Q96QK1 796 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 OR2AG1Q9H205 316 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 RAXQ9Y2V3 346 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 FIS1Q9Y3D6 152 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 KCTD3Q9Y597 815 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 ARL5AQ9Y689 179 aa11.23□□□□□ -0.61
SNAPC5-208ENST00000568875 C2orf81A6NN90 581 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 GAPDHSO14556 408 aaPredicted RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 PPM1DO15297 605 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 BRINP1O60477 761 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 MLYCDO95822 493 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 EML2O95834 649 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 NPPAP01160 153 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 RPLP0P05388 317 aaKnown RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 ALDOCP09972 364 aaKnown RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 PRR35P0CG20 571 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 MSX2P35548 267 aaPredicted RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 LSSP48449 732 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 LSAMPQ13449 338 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 NR1D2Q14995 579 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 OR4D1Q15615 310 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 C11orf91Q3C1V1 193 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 CLEC6AQ6EIG7 209 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 SPRED1Q7Z699 444 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 LDB1Q86U70 411 aaPredicted RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 PIM3Q86V86 326 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 Q8N9G6 341 aaPredicted RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 TWIST2Q8WVJ9 160 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 ATP6V1E2Q96A05 226 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 GFM1Q96RP9 751 aaKnown RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 CCDC68Q9H2F9 335 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 MID1IP1Q9NPA3 183 aa11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 CCM2LQ9NUG4 571 aaPredicted RBP11.22□□□□□ -0.61
SNAPC5-208ENST00000568875 OR51F1A6NGY5 319 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 HNRNPRO43390 633 aaKnown RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 TLX3O43711 291 aaPredicted RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 VEGFDO43915 354 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 RPS17P08708 135 aaKnown RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 UGT1A6P19224 532 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 UGT1A1P22309 533 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 UGT1A4P22310 534 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 CA5AP35218 305 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 UGT1A3P35503 534 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 UGT1A5P35504 534 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 SPAM1P38567 509 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 GPR3P46089 330 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 CLCNKAP51800 687 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 NR1H2P55055 460 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 CLCQ05315 142 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 TMEM115Q12893 351 aaPredicted RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 APOFQ13790 326 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 SEMA3AQ14563 771 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 PTPRCAPQ14761 206 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 CHRNA6Q15825 494 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 C6orf10Q5SRN2 563 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 LCN8Q6JVE9 175 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 PPP4R4Q6NUP7 873 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 ZNF547Q8IVP9 402 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 CHERPQ8IWX8 916 aaKnown RBP11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 SFRP1Q8N474 314 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 FBXO39Q8N4B4 442 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 SLCO4A1Q96BD0 722 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 SLC45A3Q96JT2 553 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 C3orf30Q96M34 536 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 C19orf43Q9BQ61 176 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 POLR1BQ9H9Y6 1135 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 ACTR3BQ9P1U1 418 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 TBC1D29Q9UFV1 150 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 SLC23A2Q9UGH3 650 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 PKP3Q9Y446 797 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 LOC400499M0QZD8 3231 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 FAM208BQ5VWN6 2430 aa11.21□□□□□ -0.61
SNAPC5-208ENST00000568875 A6NCN8 305 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 PRR19A6NJB7 356 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 D6RAR5 112 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 H7C0S8 307 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 UBXN8O00124 270 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 PIP5K1BO14986 540 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 ANGPT2O15123 496 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 STX7O15400 261 aaKnown RBP11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 MTX2O75431 263 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 NDUFS3O75489 264 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 ACP5P13686 325 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 GFAPP14136 432 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 TCN1P20061 433 aaPredicted RBP11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 LPOP22079 712 aaPredicted RBP11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 FASLGP48023 281 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 TTPAP49638 278 aa11.21□□□□□ -0.62
SNAPC5-208ENST00000568875 SLC7A2P52569 658 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms