RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 EPB42P16452 691 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 IMPDH1P20839 514 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 CASP2P42575 452 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 RAB15P59190 212 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 DNAJB13P59910 316 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 IL11RAQ14626 422 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 ZC3H12BQ5HYM0 836 aaKnown RBP17.22■□□□□ 0.35
COMMD4-222ENST00000568034 PRAMEF17Q5VTA0 474 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 VN1R4Q7Z5H5 301 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 C10orf107Q8IVU9 208 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 OR4N4Q8N0Y3 316 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 GATA6Q92908 595 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 NXPE2Q96DL1 559 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 ATP6V1G3Q96LB4 118 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 MECRQ9BV79 373 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 RARRES3Q9UL19 164 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 AKAP13Q12802 2813 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 KCNE1BA0A087WTH5 132 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 A0A1B0GTL3 188 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 TRBC2A0A5B9 178 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 H0YGG7 62 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 PPP6CO00743 305 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 CLGNO14967 610 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 TM9SF1O15321 606 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 MAP3K7O43318 606 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 ALDH3A1P30838 453 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 GCGRP47871 477 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 SCTRP47872 440 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 PIK3CGP48736 1102 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 CDH13P55290 713 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 ARF3P61204 181 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-222ENST00000568034 TRAF3Q13114 568 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 CHIT1Q13231 466 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 DOC2AQ14183 400 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 SLBPQ14493 270 aaKnown RBP eCLIP17.21■□□□□ 0.35
COMMD4-222ENST00000568034 TBCCQ15814 346 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
COMMD4-222ENST00000568034 LIPMQ5VYY2 423 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 PWWP2BQ6NUJ5 590 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 PPP1R3BQ86XI6 285 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 ANKRD53Q8N9V6 530 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 OR52B6Q8NGF0 335 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 OR8K5Q8NH50 307 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 CCDC126Q96EE4 140 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 SELENOSQ9BQE4 189 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 SPRY4Q9C004 299 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 B3GNT4Q9C0J1 378 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 SPRTNQ9H040 489 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-222ENST00000568034 GSTO2Q9H4Y5 243 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 NOL11Q9H8H0 719 aaKnown RBP17.21■□□□□ 0.35
COMMD4-222ENST00000568034 IPPKQ9H8X2 491 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 FANCEQ9HB96 536 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 PCDHGA7Q9Y5G6 932 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 PCDHGA4Q9Y5G9 962 aa17.21■□□□□ 0.35
COMMD4-222ENST00000568034 ASPMQ8IZT6 3477 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 TMEM120BA0PK00 339 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 NVLO15381 856 aaKnown RBP17.2■□□□□ 0.34
COMMD4-222ENST00000568034 P2RX6O15547 441 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 BPGMP07738 259 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF28P17035 718 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 TSPAN8P19075 237 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 SERPINB4P48594 390 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 ITGA1P56199 1179 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 VSX2P58304 361 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-222ENST00000568034 RPS15AP62244 130 aaKnown RBP17.2■□□□□ 0.34
COMMD4-222ENST00000568034 IRF8Q02556 426 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 CLCQ05315 142 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 PRTGQ2VWP7 1150 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 XKR6Q5GH73 641 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 DCAF12Q5T6F0 453 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 FAM219BQ5XKK7 198 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 CEACAM20Q6UY09 585 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 BPHLQ86WA6 291 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-222ENST00000568034 ARHGEF39Q8N4T4 335 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 MFSD9Q8NBP5 474 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 RNF31Q96EP0 1072 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 PTCD3Q96EY7 689 aaKnown RBP17.2■□□□□ 0.34
COMMD4-222ENST00000568034 AIF1LQ9BQI0 150 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 KCNK9Q9NPC2 374 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 SEMA4BQ9NPR2 832 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF225Q9UK10 706 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 ANGPTL3Q9Y5C1 460 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 AHCTF1Q8WYP5 2266 aa17.2■□□□□ 0.34
COMMD4-222ENST00000568034 SDK2Q58EX2 2172 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 FITM1A5D6W6 292 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 SRPX2O60687 465 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 KATNA1O75449 491 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 SUPT7LO94864 414 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 ZWINTO95229 277 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 CAPNS1P04632 268 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 RBMS1P29558 406 aaKnown RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 SLC5A2P31639 672 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 SLC18A1P54219 525 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 NAGLUP54802 743 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 WDR4P57081 412 aaKnown RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 SNRPNP63162 240 aaKnown RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 ADNP2Q6IQ32 1131 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 CYB5D1Q6P9G0 228 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 VN1R5Q7Z5H4 357 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 LSMEM2Q8N112 164 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms