RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CHRNA4P43681 627 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 GABRA4P48169 554 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 TERF1P54274 439 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 EMP2P54851 167 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 DHX34Q14147 1143 aaKnown RBP9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ERCC6LQ2NKX8 1250 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ACER2Q5QJU3 275 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 SLC25A25Q6KCM7 469 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 CCDC70Q6NSX1 233 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 TMEM220Q6QAJ8 160 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 TRIM73Q86UV7 250 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 RPRMLQ8N4K4 120 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.18□□□□□ -0.94
CAPN3-216ENST00000567071 CCDC89Q8N998 374 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 POGLUT1Q8NBL1 392 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-216ENST00000567071 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-216ENST00000567071 RUNDC3BQ96NL0 473 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 FERD3LQ96RJ6 166 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 MESP1Q9BRJ9 268 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 YIPF4Q9BSR8 244 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ADGRE3Q9BY15 652 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 DPH5Q9H2P9 285 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 FAM8A1Q9UBU6 413 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 B4GALT7Q9UBV7 327 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ASIC3Q9UHC3 531 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 DRG1Q9Y295 367 aaKnown RBP9.18□□□□□ -0.94
CAPN3-216ENST00000567071 TTLL3Q9Y4R7 772 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 SCN2AQ99250 2005 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 A0A0G2JK05 382 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 A0A1W2PQ72 361 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 ESYT3A0FGR9 886 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 OR2AG2A6NM03 316 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 FIGNL2A6NMB9 653 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 CLCA1A8K7I4 914 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 HCRTR1O43613 425 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 TLX2O43763 284 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-216ENST00000567071 MAFKO60675 156 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 PEX11BO96011 259 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 CTSBP07858 339 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 SP1P08047 785 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 EPXP11678 715 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 CCNCP24863 283 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 PTPN3P26045 913 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 OR1D4P47884 311 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 WASHC5Q12768 1159 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 ZBTB17Q13105 803 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 PTK6Q13882 451 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 GRM7Q14831 915 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 MEP1AQ16819 746 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 FAM214AQ32MH5 1076 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 LDLRAP1Q5SW96 308 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 SPINK14Q6IE38 97 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 PAOXQ6QHF9 649 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 B3GNT6Q6ZMB0 384 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 MAATS1Q7Z4T9 603 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 METTL27Q8N6F8 245 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF454Q8N9F8 522 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 SLCO2A1Q92959 643 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 PERPQ96FX8 193 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 TSGA13Q96PP4 275 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 CCM2Q9BSQ5 444 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 TUBB6Q9BUF5 446 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 GPR63Q9BZJ6 419 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 TFB2MQ9H5Q4 396 aaKnown RBP9.17□□□□□ -0.94
CAPN3-216ENST00000567071 LRTM1Q9HBL6 345 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF304Q9HCX3 659 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 ANKRD10Q9NXR5 420 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 EURLQ9NYK6 297 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 KLHL8Q9P2G9 620 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-216ENST00000567071 DMGDHQ9UI17 866 aaKnown RBP9.17□□□□□ -0.94
CAPN3-216ENST00000567071 MAU2Q9Y6X3 613 aa9.17□□□□□ -0.94
CAPN3-216ENST00000567071 ANK3Q12955 4377 aaKnown RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 HYKKA2RU49 373 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 FAM187AA6NFU0 413 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 MGAT4DA6NG13 374 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 TUBAL3A6NHL2 446 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ANKRD66B4E2M5 251 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 SYT5O00445 386 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 IFRD1O00458 451 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 STK10O94804 968 aaKnown RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 HLA-DQB2P05538 268 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 HEXBP07686 556 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 FAM157CP0CG43 387 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 UGT2B7P16662 529 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 TFEBP19484 476 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ACVR2AP27037 513 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 RPL22P35268 128 aaKnown RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 CD96P40200 585 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 IFI35P80217 286 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 GUCY2DQ02846 1103 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 GPS1Q13098 491 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ZIC1Q15915 447 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 QPCTQ16769 361 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 TCTE1Q5JU00 501 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ANKRD20A2Q5SQ80 823 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 C10orf62Q5T681 223 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ANKRD20A1Q5TYW2 823 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ANKRD20A3Q5VUR7 823 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms