RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CHD7Q9P2D1 2997 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 SLC9A3R1O14745 358 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 PORP16435 677 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 TACR1P25103 407 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 ZXDCQ2QGD7 858 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 PTCHD3Q3KNS1 767 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 DGKKQ5KSL6 1271 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 SYT6Q5T7P8 510 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 LRRC66Q68CR7 880 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 NEK5Q6P3R8 708 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 EIF3MQ7L2H7 374 aaKnown RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 TSPYL5Q86VY4 417 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 TMEM25Q86YD3 366 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 ZZZ3Q8IYH5 903 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 SNRNP27Q8WVK2 155 aaKnown RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 APIPQ96GX9 242 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 SH3YL1Q96HL8 342 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF641Q96N77 438 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-213ENST00000566756 DGCR6LQ9BY27 220 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 SPHK2Q9NRA0 654 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 GIN1Q9NXP7 522 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 GPRC5BQ9NZH0 403 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 MARK1Q9P0L2 795 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 CORINQ9Y5Q5 1042 aa16.23■□□□□ 0.19
CMTM3-213ENST00000566756 FUOMA2VDF0 154 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 E9PQ18 207 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CLIC1O00299 241 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 INMTO95050 263 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 EPN2O95208 641 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 KCNK5O95279 499 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 FABP3P05413 133 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 GSNP06396 782 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CEBPBP17676 345 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 HLA-FP30511 346 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 GKP32189 559 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 KDELR2P33947 212 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 MAPK10P53779 464 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 MLLT10P55197 1068 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CSNK2BP67870 215 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 PCDH1Q08174 1060 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 ATP13A5Q4VNC0 1218 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CARD16Q5EG05 197 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CBLL1Q75N03 491 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF551Q7Z340 670 aaPredicted RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 MINDY2Q8NBR6 621 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 MCOLN3Q8TDD5 553 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 SMG7Q92540 1137 aaKnown RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 ZSWIM3Q96MP5 696 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 SUV39H2Q9H5I1 410 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 NDRG4Q9ULP0 352 aaKnown RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 HS3ST2Q9Y278 367 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 TDRKHQ9Y2W6 561 aaKnown RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CHD9Q3L8U1 2897 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 PTGES3LE9PB15 166 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 KPNA4O00629 521 aaPredicted RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 SCN2BO60939 215 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 FTH1P02794 183 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 TFPTP0C1Z6 253 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 HSD3B1P14060 373 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 HSD3B2P26439 372 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 PBX2P40425 430 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 RXRGP48443 463 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 DAPP51397 102 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 PTSQ03393 145 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 DMC1Q14565 340 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 OR4F3Q6IEY1 312 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 B3GNT8Q7Z7M8 397 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 IGFN1Q86VF2 1251 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 ANKRD46Q86W74 232 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 KLHDC8AQ8IYD2 350 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 CELF5Q8N6W0 485 aaKnown RBP16.22■□□□□ 0.19
CMTM3-213ENST00000566756 OR7A2PQ8NGA2 310 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 FBXL8Q96CD0 374 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 ITPKCQ96DU7 683 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 YIPF6Q96EC8 236 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 PITX2Q99697 317 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 PBX4Q9BYU1 374 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 ASPSCR1Q9BZE9 553 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 AKIP1Q9NQ31 210 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 U3KQV3 271 aa16.22■□□□□ 0.19
CMTM3-213ENST00000566756 FPGTO14772 594 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 ZSCAN9O15535 394 aaPredicted RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF682O95780 498 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 SRCP12931 536 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 PPIBP23284 216 aaKnown RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 GRK3P35626 688 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 SERPINB10P48595 397 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 CLK3P49761 638 aaKnown RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 BCAP31P51572 246 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 NEK2P51955 445 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 ITGA1P56199 1179 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 PIGFQ07326 219 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 SFSWAPQ12872 951 aaKnown RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 PPP1R8Q12972 351 aaKnown RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 CYP2U1Q7Z449 544 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 CNIH3Q8TBE1 160 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 IPCEF1Q8WWN9 437 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms