RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CES2O00748 559 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 TBPL1P62380 186 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 EEF1A2Q05639 463 aaKnown RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 PTK6Q13882 451 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 RBM20Q5T481 1227 aaKnown RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 FAAH2Q6GMR7 532 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 ISLR2Q6UXK2 745 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 MBOAT1Q6ZNC8 495 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 LINC00696Q6ZRV3 163 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 NDUFAF7Q7L592 441 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 VN1R4Q7Z5H5 301 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 IGDCC3Q8IVU1 814 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 ZC3H7AQ8IWR0 971 aaKnown RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 CNDP1Q96KN2 507 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 EBNA1BP2Q99848 306 aaKnown RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 TGIF2Q9GZN2 237 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 EPS8L2Q9H6S3 715 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 MKKSQ9NPJ1 570 aaPredicted RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 CCDC177Q9NQR7 707 aaPredicted RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 TMEM184CQ9NVA4 438 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 C14orf105Q9NVL8 296 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 ASIC3Q9UHC3 531 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 ERRFI1Q9UJM3 462 aaPredicted RBP17.39■□□□□ 0.37
USB1-213ENST00000566292 SH2B3Q9UQQ2 575 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 PDE10AQ9Y233 779 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 IGHV1-45A0A0A0MS14 117 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 NSG1A0A0A6YYJ2 146 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 ANKUB1A6NFN9 424 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 TXNDC9O14530 226 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 ANXA5P08758 320 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 IVDP26440 423 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 TSFMP43897 325 aaKnown RBP17.38■□□□□ 0.37
USB1-213ENST00000566292 CDKN2DP55273 166 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 MAT1AQ00266 395 aaKnown RBP17.38■□□□□ 0.37
USB1-213ENST00000566292 MFAP5Q13361 173 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 FAM53BQ14153 422 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 ZNF169Q14929 603 aaPredicted RBP17.38■□□□□ 0.37
USB1-213ENST00000566292 UGT3A1Q6NUS8 523 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 PAQR3Q6TCH7 311 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 KBTBD2Q8IY47 623 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 SHISA5Q8N114 240 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 AMER2Q8N7J2 671 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 PSMF1Q92530 271 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 LMF1Q96S06 567 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 PLAC1Q9HBJ0 212 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 SLC17A6Q9P2U8 582 aa17.38■□□□□ 0.37
USB1-213ENST00000566292 TEX15Q9BXT5 2789 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 TTC4O95801 387 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 DDAH2O95865 285 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 AHSGP02765 367 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 HEXBP07686 556 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 CELA2AP08217 269 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 PRR35P0CG20 571 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 SOX11P35716 441 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 CSNK1G2P78368 415 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 C4orf17Q53FE4 359 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 SPANXN3Q5MJ09 141 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 LRRC8EQ6NSJ5 796 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 CNTN4Q8IWV2 1026 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 CATSPER1Q8NEC5 780 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 MCOLN3Q8TDD5 553 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 GRHL3Q8TE85 626 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 SLCO2A1Q92959 643 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 CCDC138Q96M89 665 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 MACROD1Q9BQ69 325 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 PARVBQ9HBI1 364 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 AGPAT4Q9NRZ5 378 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 TRMT1Q9NXH9 659 aaKnown RBP17.37■□□□□ 0.37
USB1-213ENST00000566292 TAS2R13Q9NYV9 303 aa17.37■□□□□ 0.37
USB1-213ENST00000566292 KCNE1BA0A087WTH5 132 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 LOC102723996A0A087X1L8 192 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 A1L4Q6 167 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 WIPF3A6NGB9 483 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 E2F3O00716 465 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 ZSCAN12O43309 604 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 JRKO75564 520 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 LDLRP01130 860 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 C8GP07360 202 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 HRH2P25021 359 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 CXCR2P25025 360 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 RGS4P49798 205 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 PGGT1BP53609 377 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 RPS15AP62244 130 aaKnown RBP17.36■□□□□ 0.37
USB1-213ENST00000566292 CDC16Q13042 620 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 PCOLCEQ15113 449 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 TLR1Q15399 786 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 NDUFA9Q16795 377 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 PHKG1Q16816 387 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 BBS9Q3SYG4 887 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 B3GNTL1Q67FW5 361 aaPredicted RBP17.36■□□□□ 0.37
USB1-213ENST00000566292 AGTRAPQ6RW13 159 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 TMEM205Q6UW68 189 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 PRSS41Q7RTY9 318 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 ST6GALNAC3Q8NDV1 305 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 OR9A4Q8NGU2 314 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 BRIX1Q8TDN6 353 aaKnown RBP17.36■□□□□ 0.37
USB1-213ENST00000566292 CERS2Q96G23 380 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 PCBD2Q9H0N5 130 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 ATG10Q9H0Y0 220 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms