RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ZSCAN4Q8NAM6 433 aaPredicted RBP13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 OR6N1Q8NGY5 312 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 PHOSPHO1Q8TCT1 267 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 SHDQ96IW2 340 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 KCTD7Q96MP8 289 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 TMEM109Q9BVC6 243 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 AKTIPQ9H8T0 292 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 UCKL1Q9NWZ5 548 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 CYTH4Q9UIA0 394 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 PLEKHA6Q9Y2H5 1048 aa13.25□□□□□ -0.29
CX3CL1-204ENST00000565912 CH25HO95992 272 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 MECP2P51608 486 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 KCNQ1P51787 676 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 OCLNQ16625 522 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 DECR1Q16698 335 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 MYLK3Q32MK0 819 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 ADGRD2Q7Z7M1 963 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 CCDC107Q8WV48 283 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 SMPDL3AQ92484 453 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 USP29Q9HBJ7 922 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 C14orf105Q9NVL8 296 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 TMEM63AO94886 807 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 IL33O95760 270 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 IFNA21P01568 189 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 DNAJA1P31689 397 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 ARL3P36405 182 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 DGKQP52824 942 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 SLC3A1Q07837 685 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 ALG10Q5BKT4 473 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 C1orf189Q5VU69 101 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 ZNF776Q68DI1 518 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 GALNT15Q8N3T1 639 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 NTAN1Q96AB6 310 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 GRIA1P42261 906 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 MAN2A2P49641 1150 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 CREB5Q02930 508 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 DRICH1Q6PGQ1 229 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 INO80EQ8NBZ0 244 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 NFKBIDQ8NI38 313 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 GEMIN6Q8WXD5 167 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 TFGQ92734 400 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 ARHGAP9Q9BRR9 750 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 PIGVQ9NUD9 493 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 A0A1W2PQ45 241 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 A0A1W2PQY0 241 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 DPPA5A6NC42 116 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 FAM170BA6NMN3 283 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 J3QLW9 94 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 CYP11A1P05108 521 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 SRCP12931 536 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 ZNF19P17023 458 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 MAGEA12P43365 314 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 PER3P56645 1201 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 NPTX1Q15818 432 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 NCBP2-AS2Q69YL0 99 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 CMTM8Q8IZV2 173 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 TMED9Q9BVK6 235 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 SEZ6LQ9BYH1 1024 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 OXSMQ9NWU1 459 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 RCBTB2O95199 551 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 BPNT1O95861 308 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 SLC2A2P11168 524 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 UNGP13051 313 aaPredicted RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 GSTM3P21266 225 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 EIF5AP63241 154 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 DAG1Q14118 895 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 SLC9A4Q6AI14 798 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 NATD1Q8N6N6 113 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 RAB2BQ8WUD1 216 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 GALPQ9UBC7 116 aa13.24□□□□□ -0.29
CX3CL1-204ENST00000565912 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 ZNF670-ZNF695F2Z2N8 137 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 NUAK1O60285 661 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 HCKP08631 526 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 HOXB2P14652 356 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 CREB1P16220 341 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 ARRB1P49407 418 aaPredicted RBP13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 SYT16Q17RD7 645 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 GKN2Q86XP6 184 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 LRRC58Q96CX6 371 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 GIN1Q9NXP7 522 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 PEAK1Q9H792 1746 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 LOC100509620A0A075B734 347 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 BLOC1S5-TXNDC5H3BN57 136 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 ACOX3O15254 700 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 EEFSECP57772 596 aaKnown RBP13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 PNPLA2Q96AD5 504 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 SUSD3Q96L08 255 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 ASPNQ9BXN1 380 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 ZNF69Q9UC07 566 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 DKKL1Q9UK85 242 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 A0A1B0GVT2 93 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 KANTRA0A1W2PQU2 76 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 A8MT66 165 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 UPK3BL1B0FP48 263 aa13.23□□□□□ -0.29
CX3CL1-204ENST00000565912 UPK3BL2E5RIL1 263 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms