RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RUVBL1Q9Y265 456 aaKnown RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 DOCK10Q96BY6 2186 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 BOD1L1Q8NFC6 3051 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 CXorf49A8MYA2 514 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 EIF3FO00303 357 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 P2RX6O15547 441 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 HIST1H2AGP0C0S8 130 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 HIST1H2ADP20671 130 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 IL2P60568 153 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 ABATP80404 500 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 ILF2Q12905 390 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 ZNF460Q14592 562 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 RBBP7Q16576 425 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 VWA2Q5GFL6 755 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 ZNF425Q6IV72 752 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 ZC3HC1Q86WB0 502 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 FKBP10Q96AY3 582 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 PYCR2Q96C36 320 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 MMABQ96EY8 250 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 HIST1H2AHQ96KK5 128 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 CCDC138Q96M89 665 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 IP6K3Q96PC2 410 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 SPSB2Q99619 263 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 HIST1H2AJQ99878 128 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 MACROD1Q9BQ69 325 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 H2AFJQ9BTM1 129 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 CRB3Q9BUF7 120 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 RHOJQ9H4E5 214 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 PARVBQ9HBI1 364 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 MAP10Q9P2G4 905 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 PLAAQ9Y263 795 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 VWA7Q9Y334 891 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 ZNF451Q9Y4E5 1061 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 PCDHGA9Q9Y5G4 932 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 KLK4Q9Y5K2 254 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 SCN2AQ99250 2005 aa12.99□□□□□ -0.33
VPS9D1-204ENST00000565023 FAM95CA0A1B0GW59 222 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 FEZF1A0PJY2 475 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 ALBP02768 609 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 FDXRP22570 491 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 ITGA3P26006 1051 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 STX2P32856 288 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 OCA2Q04671 838 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 SP140Q13342 867 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 PRTGQ2VWP7 1150 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 DCAF10Q5QP82 559 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 FAAH2Q6GMR7 532 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 C17orf64Q86WR6 236 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 FBF1Q8TES7 1133 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 MIEF2Q96C03 454 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 OR2A5Q96R48 311 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 CPNE1Q99829 537 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 MESP1Q9BRJ9 268 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 FUT8Q9BYC5 575 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 UNKQ9C0B0 810 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 ARL15Q9NXU5 204 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 NINJ2Q9NZG7 142 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 IKZF3Q9UKT9 509 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 UBR5O95071 2799 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-204ENST00000565023 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 NPEPPSL1A6NEC2 478 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 I3L1I5 382 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 AGPSO00116 658 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 SLC16A5O15375 505 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 DPM1O60762 260 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 CEACAM4O75871 244 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 TSPAN12O95859 305 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 ANXA5P08758 320 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 CDH1P12830 882 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 MMP11P24347 488 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 MAT1AQ00266 395 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 MEF2AQ02078 507 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 KLC1Q07866 573 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 SYT16Q17RD7 645 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 TMEM207Q6UWW9 146 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 GALNT16Q8N428 558 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 EIF1ADQ8N9N8 165 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 STT3BQ8TCJ2 826 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 C8orf44Q96CB5 159 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 VPS39Q96JC1 886 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 TRIM54Q9BYV2 358 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 CDC42EP4Q9H3Q1 356 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 ATP13A2Q9NQ11 1180 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 TMEM184CQ9NVA4 438 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 ZNF282Q9UDV7 671 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 C3orf18Q9UK00 162 aa12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 MRPS2Q9Y399 296 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 TEP1Q99973 2627 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-204ENST00000565023 NBASA2RRP1 2371 aa12.96□□□□□ -0.33
VPS9D1-204ENST00000565023 DOPEY2Q9Y3R5 2298 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms