RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 HOXB7P09629 217 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 SHC1P29353 583 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 NF2P35240 595 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 PPARGP37231 505 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 MAGEA9P43362 315 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 GSCP56915 257 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 SP3Q02447 781 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 HNRNPDQ14103 355 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 ZKSCAN8Q15776 578 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 PKN2Q16513 984 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 FASTKD1Q53R41 847 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 CYP4A22Q5TCH4 519 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 JADE1Q6IE81 842 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 KLHL35Q6PF15 583 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 CORO6Q6QEF8 472 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 LRRTM1Q86UE6 522 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 ARID3BQ8IVW6 561 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 HJURPQ8NCD3 748 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 ANKRD20A12PQ8NF67 263 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 OR2T11Q8NH01 316 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 GOLGA5Q8TBA6 731 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 HPSE2Q8WWQ2 592 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 DYRK2Q92630 601 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 DAZLQ92904 295 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 ZKSCAN4Q969J2 545 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 DCPSQ96C86 337 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 MTERF3Q96E29 417 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 ERO1AQ96HE7 468 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 ZMAT2Q96NC0 199 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 MXD3Q9BW11 206 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 CLEC7AQ9BXN2 247 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 TEX12Q9BXU0 123 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 MAK16Q9BXY0 300 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 SMARCAD1Q9H4L7 1026 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 SH2D4AQ9H788 454 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 INTS9Q9NV88 658 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 SUCLA2Q9P2R7 463 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 AMACRQ9UHK6 382 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 PCDHGB4Q9UN71 923 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 USP16Q9Y5T5 823 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 V9GYY5 206 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 SH3TC1Q8TE82 1336 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 ANKRD31Q8N7Z5 1873 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 NUP98P52948 1817 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 H0YHG0 523 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 KIF2AO00139 706 aaPredicted RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 MPHOSPH10O00566 681 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 UBE2CO00762 179 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 POLR3GO15318 223 aaPredicted RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 ATP8B1O43520 1251 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 GJB3O75712 270 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 BEST1O76090 585 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 SRPRAP08240 638 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 VDRP11473 427 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 ACADSP16219 412 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 EIF2DP41214 584 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 PTGER3P43115 390 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 LBX1P52954 281 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 HERV-K104P61576 105 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 FKBP1BP68106 108 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 SARNPP82979 210 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 RASA2Q15283 850 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 MED22Q15528 200 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 ZSCAN26Q16670 478 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 WLSQ5T9L3 541 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 LEKR1Q6ZMV7 388 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 MCM10Q7L590 875 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 CDC20BQ86Y33 519 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 CPSF7Q8N684 471 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 OR1J1Q8NGS3 322 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 JAKMIP2Q96AA8 810 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 CAPNS2Q96L46 248 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 CMTM3Q96MX0 182 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 OR2A14Q96R47 310 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 PAIP2Q9BPZ3 127 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 PIGQQ9BRB3 760 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 FUCA2Q9BTY2 467 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 HGH1Q9BTY7 390 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 MRPL1Q9BYD6 325 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 EDEM3Q9BZQ6 932 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 HHATLQ9HCP6 504 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 MBNL1Q9NR56 388 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 ARGLU1Q9NWB6 273 aaPredicted RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 ZNF446Q9NWS9 450 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 HYPKQ9NX55 129 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 RNF186Q9NXI6 227 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 TRMT112Q9UI30 125 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 KLK13Q9UKR3 277 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 PYCARDQ9ULZ3 195 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 RRP15Q9Y3B9 282 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 ATP6V0A2Q9Y487 856 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 SESN1Q9Y6P5 492 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.66□□□□□ -1.82
CHD9-212ENST00000564641 AKAP11Q9UKA4 1901 aa3.66□□□□□ -1.82
CHD9-212ENST00000564641 GLOD5A6NK44 160 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.65□□□□□ -1.83
CHD9-212ENST00000564641 HS6ST1O60243 411 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 NXPH2O95156 264 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms