RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PITX2Q99697 317 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 DOHHQ9BU89 302 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 DUSP26Q9BV47 211 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 DGCR6LQ9BY27 220 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 ACPTQ9BZG2 426 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 FAM83DQ9H4H8 585 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 LIN28AQ9H9Z2 209 aaKnown RBP7.4□□□□□ -1.22
ATXN3-249ENST00000564606 RRAGCQ9HB90 399 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 ITM2CQ9NQX7 267 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 THG1LQ9NWX6 298 aaKnown RBP7.4□□□□□ -1.22
ATXN3-249ENST00000564606 IMPAD1Q9NX62 359 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 PDP1Q9P0J1 537 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-249ENST00000564606 SLAMF8Q9P0V8 285 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 GULP1Q9UBP9 304 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 SEC14L4Q9UDX3 406 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 SRRDQ9UH36 339 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 EVLQ9UI08 416 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-249ENST00000564606 NDRG4Q9ULP0 352 aaKnown RBP7.4□□□□□ -1.22
ATXN3-249ENST00000564606 HS3ST2Q9Y278 367 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 OR51B4Q9Y5P0 310 aa7.4□□□□□ -1.22
ATXN3-249ENST00000564606 MN1Q10571 1320 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-249ENST00000564606 TRPM7Q96QT4 1865 aa7.4□□□□□ -1.23
ATXN3-249ENST00000564606 MICAL3Q7RTP6 2002 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 FOXE1O00358 373 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SLC9A3R1O14745 358 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SCAMP2O15127 329 aaKnown RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CLDN7O95471 211 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 NADKO95544 446 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 OXSR1O95747 527 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CLIC3O95833 236 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 KLKB1P03952 638 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CKMP06732 381 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SDC1P18827 310 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 MATN1P21941 496 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 VIPR1P32241 457 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 IFNA8P32881 189 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SHMT2P34897 504 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CDKN1CP49918 316 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SLC35A2P78381 396 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 HMGCS1Q01581 520 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 IL1RL1Q01638 556 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 RELAQ04206 551 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 EMX1Q04741 257 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 HSPA14Q0VDF9 509 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CBX3Q13185 183 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 GBX1Q14549 363 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CLCA4Q14CN2 919 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 MAD2L1BPQ15013 274 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 ZNF404Q494X3 552 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CCDC92Q53HC0 331 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 XKR6Q5GH73 641 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CST9Q5W186 159 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 MED27Q6P2C8 311 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TRAF7Q6Q0C0 670 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CRTC1Q6UUV9 634 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 LINGO4Q6UY18 593 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 PAGE2Q7Z2X7 111 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 ZSWIM9Q86XI8 627 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 ARMC8Q8IUR7 673 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 NPAS3Q8IXF0 933 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 KRT78Q8N1N4 520 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 STX19Q8N4C7 294 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 RAB42Q8N4Z0 105 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TTC9BQ8N6N2 239 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 FLCNQ8NFG4 579 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 NETO1Q8TDF5 533 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SETD7Q8WTS6 366 aaKnown RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 GEMIN6Q8WXD5 167 aaKnown RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 LINC01599Q8WXQ3 324 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 ESAMQ96AP7 390 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 ECHDC3Q96DC8 303 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 APOLD1Q96LR9 279 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TSSK3Q96PN8 268 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 VPS35Q96QK1 796 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 PSD2Q9BQI7 771 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TEX12Q9BXU0 123 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 GABARAPL3Q9BY60 117 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TM6SF2Q9BZW4 377 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 PITHD1Q9GZP4 211 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 BRD9Q9H8M2 597 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TRIM45Q9H8W5 580 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SMURF2Q9HAU4 748 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TPT1P8Q9HAU6 139 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 ZSCAN32Q9NX65 697 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SPG21Q9NZD8 308 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CNOT2Q9NZN8 540 aaKnown RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CCDC59Q9P031 241 aaKnown RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 HECAQ9UBI9 543 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-249ENST00000564606 SPASTQ9UBP0 616 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 DPP7Q9UHL4 492 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 IKZF3Q9UKT9 509 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TMCC3Q9ULS5 477 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 PPT2Q9UMR5 302 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 CFL2Q9Y281 166 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 TSC22D4Q9Y3Q8 395 aa7.39□□□□□ -1.23
ATXN3-249ENST00000564606 GPSM3Q9Y4H4 160 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms