RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 IRX6P78412 446 aaPredicted RBP2.49□□□□□ -2.01
CHD9-207ENST00000562806 IRX4P78413 519 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 MS4A2Q01362 244 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 TOMM20Q15388 145 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 LPAL2Q16609 132 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 PTGISQ16647 500 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 TWISTNBQ3B726 338 aaPredicted RBP2.49□□□□□ -2.01
CHD9-207ENST00000562806 GLIPR1L2Q4G1C9 344 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 C6orf136Q5SQH8 315 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 IL27RAQ6UWB1 636 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 C4orf19Q8IY42 314 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 OR8H2Q8N162 312 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 METTL4Q8N3J2 472 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 IQUBQ8NA54 791 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 LRRC15Q8TF66 581 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 FAM222BQ8WU58 562 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 SLC45A3Q96JT2 553 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 ZNF558Q96NG5 402 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 LGMNQ99538 433 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 PKP2Q99959 881 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 CDK19Q9BWU1 502 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 GTPBP2Q9BX10 602 aaKnown RBP2.49□□□□□ -2.01
CHD9-207ENST00000562806 SLC7A10Q9NS82 523 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 EXOC1Q9NV70 894 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 NUDT4Q9NZJ9 180 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 WDR35Q9P2L0 1181 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 THEGQ9P2T0 379 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 POLLQ9UGP5 575 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 SLC12A6Q9UHW9 1150 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 ANGPTL3Q9Y5C1 460 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 SMAD5-AS1Q9Y6J3 95 aa2.49□□□□□ -2.01
CHD9-207ENST00000562806 RNF123Q5XPI4 1314 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 A0A1W2PPW3 197 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 A0A1W2PR80 420 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ASB14A6NK59 587 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 SNURFLB1AK76 121 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 SOCS3O14543 225 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 TRAFD1O14545 582 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 SURF4O15260 269 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 SPRY1O43609 319 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 DKC1O60832 514 aaKnown RBP eCLIP2.48□□□□□ -2.01
CHD9-207ENST00000562806 EIF5BO60841 1220 aaKnown RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 DNTTP04053 509 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ZSCAN5DPP0CG00 497 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ZNF10P21506 573 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 TLX1P31314 330 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 PGFP49763 221 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 MFAP3P55082 362 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 XGP55808 180 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ERVK-16P61578 105 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 CALCOCO2Q13137 446 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 KCTD2Q14681 263 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 NONOQ15233 471 aaKnown RBP eCLIP2.48□□□□□ -2.01
CHD9-207ENST00000562806 HYAL4Q2M3T9 481 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 GPR33Q49SQ1 333 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 RPUSD3Q6P087 351 aaKnown RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 FUT10Q6P4F1 479 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 MOXD1Q6UVY6 613 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 LCLAT1Q6UWP7 414 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 MACC1Q6ZN28 852 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 Q6ZRP5 223 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 SLC24A5Q71RS6 500 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ZFAND4Q86XD8 727 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ERC1Q8IUD2 1116 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 TIGD4Q8IY51 512 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 GBP7Q8N8V2 638 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 CCDC63Q8NA47 563 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 CCDC191Q8NCU4 936 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 OR6J1Q8NGC5 347 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 RASL10AQ92737 203 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 ZNF486Q96H40 463 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 C18orf12Q96KH6 178 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 BAG1Q99933 345 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 OVOL2Q9BRP0 275 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 SLC2A11Q9BYW1 496 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 TRIM6Q9C030 488 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 OR10A4Q9H209 315 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 SNX25Q9H3E2 840 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 GPN1Q9HCN4 374 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 DNAJC4Q9NNZ3 241 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 CCDC177Q9NQR7 707 aaPredicted RBP2.48□□□□□ -2.01
CHD9-207ENST00000562806 PANK4Q9NVE7 773 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 TBC1D13Q9NVG8 400 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 MUTYHQ9UIF7 546 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 FBXL4Q9UKA2 621 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 LIPGQ9Y5X9 500 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 CACNA1FO60840 1977 aa2.48□□□□□ -2.01
CHD9-207ENST00000562806 IGHV3OR16-10A0A075B7F0 116 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 A0A087WV48 116 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 MEX3AA1L020 520 aaKnown RBP2.47□□□□□ -2.01
CHD9-207ENST00000562806 CYSRT1A8MQ03 144 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 TMEM150CB9EJG8 249 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 CYTIPO60759 359 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 MTRF1O75570 445 aaKnown RBP2.47□□□□□ -2.01
CHD9-207ENST00000562806 DUS4LO95620 317 aaKnown RBP2.47□□□□□ -2.01
CHD9-207ENST00000562806 GSRP00390 522 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 QDPRP09417 244 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 FDPSP14324 419 aaKnown RBP2.47□□□□□ -2.01
CHD9-207ENST00000562806 SOX3P41225 446 aa2.47□□□□□ -2.01
CHD9-207ENST00000562806 OR3A3P47888 321 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms