RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 ZNF551Q7Z340 670 aaPredicted RBP9.46□□□□□ -0.89
SMG1-205ENST00000561947 SERPINA11Q86U17 422 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 DHRSXQ8N5I4 330 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 GPR156Q8NFN8 814 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 NETO1Q8TDF5 533 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 CYGBQ8WWM9 190 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 POP5Q969H6 163 aaKnown RBP9.46□□□□□ -0.89
SMG1-205ENST00000561947 HAUS8Q9BT25 410 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 DUSP26Q9BV47 211 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 GRIP2Q9C0E4 1043 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 RSPH9Q9H1X1 276 aaPredicted RBP9.46□□□□□ -0.89
SMG1-205ENST00000561947 CAAP1Q9H8G2 361 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 CCDC177Q9NQR7 707 aaPredicted RBP9.46□□□□□ -0.89
SMG1-205ENST00000561947 DNAJB9Q9UBS3 223 aa9.46□□□□□ -0.89
SMG1-205ENST00000561947 CLIC1O00299 241 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 FOXE1O00358 373 aaPredicted RBP9.46□□□□□ -0.9
SMG1-205ENST00000561947 EPN2O95208 641 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 SERPINA1P01009 418 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 LAMP1P11279 417 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 HPCAL1P37235 193 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 PEX19P40855 299 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 WASP42768 502 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 TAS2R38P59533 333 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 CDK3Q00526 305 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 LAPTM5Q13571 262 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 ENPP2Q13822 863 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 DAG1Q14118 895 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 CST6Q15828 149 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 HIST2H2ACQ16777 129 aaPredicted RBP9.46□□□□□ -0.9
SMG1-205ENST00000561947 HKDC1Q2TB90 917 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 NADK2Q4G0N4 442 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 HIST2H2AA3Q6FI13 130 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 ANKRD26P1Q6NSI1 321 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 NXPE4Q6UWF7 544 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 CAMKMTQ7Z624 323 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 AMZ2Q86W34 360 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 CACUL1Q86Y37 369 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 CLECL1Q8IZS7 167 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
SMG1-205ENST00000561947 SETD7Q8WTS6 366 aaKnown RBP9.46□□□□□ -0.9
SMG1-205ENST00000561947 MYADMQ96S97 322 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 SIRT5Q9NXA8 310 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 ASF1AQ9Y294 204 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 BTBD3Q9Y2F9 522 aa9.46□□□□□ -0.9
SMG1-205ENST00000561947 TRANK1O15050 2925 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 YY2O15391 372 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 LINC01565O15544 149 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PI15O43692 258 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PCDH7O60245 1069 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 OR6B1O95007 311 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 CPSF4O95639 269 aaKnown RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 CST1P01037 141 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 HOXB6P17509 224 aaKnown RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 ENGP17813 658 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 KELP23276 732 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 GDI1P31150 447 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 ALDH3A2P51648 485 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 ARSFP54793 590 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 NR1H2P55055 460 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 WSCD2Q2TBF2 565 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 CYBRD1Q53TN4 286 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 OTUD3Q5T2D3 398 aaPredicted RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 CPTPQ5TA50 214 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 ANKRD54Q6NXT1 300 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 GALNT18Q6P9A2 607 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 TMEM184AQ6ZMB5 413 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 ZNF621Q6ZSS3 439 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 GPR155Q7Z3F1 870 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 DCUN1D3Q8IWE4 304 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 OXR1Q8N573 874 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 OR5AR1Q8NGP9 310 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 RAD51AP1Q96B01 352 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 SH3KBP1Q96B97 665 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 FBXL20Q96IG2 436 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 CLK4Q9HAZ1 481 aaKnown RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 DMRT3Q9NQL9 472 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 SLC23A2Q9UGH3 650 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 BTNL2Q9UIR0 455 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 UTS2RQ9UKP6 389 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 NUP214P35658 2090 aaPredicted RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 GABRR3A8MPY1 467 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PCDH8O95206 1070 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 SNAP29O95721 258 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 HPRP00739 348 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 C1QCP02747 245 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 FESP07332 822 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 GPX2P18283 190 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 IDSP22304 550 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 CAMK2GQ13555 558 aaPredicted RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 ITPRIPL2Q3MIP1 535 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 KCTD21Q4G0X4 260 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PRAMEF14Q5SWL7 426 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PRAMEF13Q5VWM6 474 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 LCTLQ6UWM7 567 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms