RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 YIPF2Q9BWQ6 316 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 DRC3Q9H069 523 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 PARVBQ9HBI1 364 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 ZBTB20Q9HC78 741 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 SLAMF7Q9NQ25 335 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 C3orf18Q9UK00 162 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 CDC14AQ9UNH5 594 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 SNX24Q9Y343 169 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 PSAT1Q9Y617 370 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 IGLV3-12A0A075B6K2 115 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 A0A0A6YYC8 382 aaPredicted RBP16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 I3L1I5 382 aaPredicted RBP16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 SLC16A5O15375 505 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 FOXS1O43638 330 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 SOX8P57073 446 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 IL2P60568 153 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 SRSF1Q07955 248 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 NAE1Q13564 534 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 SYT16Q17RD7 645 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 GARNL3Q5VVW2 1013 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 FAM45BPQ6NSW5 357 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 VN1R4Q7Z5H5 301 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 LAPTM4BQ86VI4 370 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 PARP9Q8IXQ6 854 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 C17orf53Q8N3J3 647 aaPredicted RBP16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 FAM45AQ8TCE6 357 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 NACC2Q96BF6 587 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 MVB12AQ96EY5 273 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 TMEM184CQ9NVA4 438 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 ARL15Q9NXU5 204 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 ZFATQ9P243 1243 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 MAP10Q9P2G4 905 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 IKZF3Q9UKT9 509 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 CORO1CQ9ULV4 474 aaPredicted RBP16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 MAP4K5Q9Y4K4 846 aa16.35■□□□□ 0.21
CDC42BPB-208ENST00000561271 MAP2K7O14733 419 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 PRPF4O43172 522 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 ANXA5P08758 320 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 CDH1P12830 882 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 ACPPP15309 386 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 SAT1P21673 171 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 GNLYP22749 145 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 RPS15AP62244 130 aaKnown RBP16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 CSNK1G2P78368 415 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 MAT1AQ00266 395 aaKnown RBP16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 RELAQ04206 551 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 MGAT5Q09328 741 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 ZNF460Q14592 562 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 INPP5JQ15735 1006 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 CAPN12Q6ZSI9 719 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 C17orf64Q86WR6 236 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 PYCR2Q96C36 320 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 MACROD1Q9BQ69 325 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 SGPP1Q9BX95 441 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 PCBD2Q9H0N5 130 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 DPH5Q9H2P9 285 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 VWA7Q9Y334 891 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 CSAG2Q9Y5P2 127 aa16.34■□□□□ 0.21
CDC42BPB-208ENST00000561271 MAST4O15021 2626 aa16.33■□□□□ 0.21
CDC42BPB-208ENST00000561271 FEZF1A0PJY2 475 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 CLEC18AA5D8T8 446 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 PABPN1LA6NDY0 278 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 IDSB3KWA1 339 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 E7ESA3 106 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 TXNDC9O14530 226 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 KLHL41O60662 606 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 VPS4BO75351 444 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 IPO13O94829 963 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 HIST1H2AGP0C0S8 130 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZNF37AP17032 561 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 HIST1H2ADP20671 130 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 SLC26A3P40879 764 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 BCL6P41182 706 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 EEF1A2Q05639 463 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 C2orf54Q08AI8 447 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 Q0VFX4 171 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 UBAP2LQ14157 1087 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 FRG1Q14331 258 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZXDCQ2QGD7 858 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 PLEKHN1Q494U1 663 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 IRAK1BP1Q5VVH5 260 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 FAAH2Q6GMR7 532 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 LCTLQ6UWM7 567 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 IGFL3Q6UXB1 125 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 CLEC18BQ6UXF7 455 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 PRSS41Q7RTY9 318 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZC3H7AQ8IWR0 971 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZBED8Q8IZ13 594 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 CLEC18CQ8NCF0 446 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 GALNT11Q8NCW6 608 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 OR9A4Q8NGU2 314 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZCCHC10Q8TBK6 192 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 HIST1H2AHQ96KK5 128 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 HIST1H2AJQ99878 128 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 H2AFJQ9BTM1 129 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ILKAPQ9H0C8 392 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZNF160Q9HCG1 818 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 C14orf105Q9NVL8 296 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 RNF14Q9UBS8 474 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 VPS4AQ9UN37 437 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms