RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CDSNQ15517 529 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 OR1C1Q15619 314 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 PRTGQ2VWP7 1150 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 KRTCAP3Q53RY4 240 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 ACER2Q5QJU3 275 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 FBXO42Q6P3S6 717 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 LANCL3Q6ZV70 420 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 CPEB2Q7Z5Q1 589 aaKnown RBP9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZC3H7AQ8IWR0 971 aaKnown RBP9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 EID3Q8N140 333 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 AMER3Q8N944 861 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 AGAP11Q8TF27 550 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 C14orf79Q96F83 325 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF778Q96MU6 729 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 SIGLEC12Q96PQ1 595 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 PLCD4Q9BRC7 762 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 RBSNQ9H1K0 784 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 MCCC2Q9HCC0 563 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 TAC3Q9UHF0 121 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 TCAF1Q9Y4C2 921 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 ITPR3Q14573 2671 aa9.93□□□□□ -0.82
CDC42BPB-207ENST00000560492 LOC102723996A0A087X1L8 192 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 A0A1W2PPV9 198 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 ERI2A8K979 691 aaKnown RBP9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 TXNDC9O14530 226 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 CD3EAPO15446 510 aaKnown RBP9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 PHF2O75151 1096 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 SYF2O95926 243 aaKnown RBP9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 CD1EP15812 388 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 SLC26A3P40879 764 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 ART1P52961 327 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 TAS2R50P59544 299 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 CSNK1G2P78368 415 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 HSF1Q00613 529 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 TUBA3CQ13748 450 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 MAPKAPK3Q16644 382 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 MEP1AQ16819 746 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 MEI1Q5TIA1 1274 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 GARNL3Q5VVW2 1013 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 TUBA3EQ6PEY2 450 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 SPNS3Q6ZMD2 512 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF534Q76KX8 674 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 GALNTL5Q7Z4T8 443 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 TMEM200AQ86VY9 491 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 PLD3Q8IV08 490 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 KLHDC8BQ8IXV7 354 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 GHDCQ8N2G8 530 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 HORMAD2Q8N7B1 307 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 UBL4BQ8N7F7 174 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 OR9A1PQ8NGU1 263 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 OR9A4Q8NGU2 314 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 MCOLN3Q8TDD5 553 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 ADAMTS18Q8TE60 1221 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 THAP3Q8WTV1 239 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 SMPDL3AQ92484 453 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 PRR14Q9BWN1 585 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 TGIF2Q9GZN2 237 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 VN1R1Q9GZP7 353 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 HCN3Q9P1Z3 774 aa9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 MARCH4Q9P2E8 410 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-207ENST00000560492 AKAP9Q99996 3911 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 A0A1W2PQ72 361 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF839A8K0R7 811 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 GABRR3A8MPY1 467 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 E5RI56 91 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ASNA1O43681 348 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 SUN1O94901 812 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 CATP04040 527 aaKnown RBP9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 APRTP07741 180 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 EZRP15311 586 aaKnown RBP9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF24P17028 368 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 CHRM3P20309 590 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 FMO4P31512 558 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 FDFT1P37268 417 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 GRIA1P42261 906 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 SESN2P58004 480 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ICE2Q659A1 982 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 PLAG1Q6DJT9 500 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 SPINK14Q6IE38 97 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 TMEM205Q6UW68 189 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 PEX26Q7Z412 305 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 PAQR7Q86WK9 346 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 CRLF3Q8IUI8 442 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 SLC5A8Q8N695 610 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 PPFIBP2Q8ND30 876 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 HMGCLL1Q8TB92 370 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZCCHC10Q8TBK6 192 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ALG3Q92685 438 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 IMMP1LQ96LU5 166 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 CYTH2Q99418 400 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 SPOCK3Q9BQ16 436 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 RBCK1Q9BYM8 510 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ETNK1Q9HBU6 452 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 ENAMQ9NRM1 1142 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 RAB6BQ9NRW1 208 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 FAM114A2Q9NRY5 505 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms