RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 WDR54Q9H977 334 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF160Q9HCG1 818 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 SSU72Q9NP77 194 aaKnown RBP8.89□□□□□ -0.99
SMAD3-215ENST00000560424 TREX1Q9NSU2 369 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 NSMCE4AQ9NXX6 385 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 ACTR10Q9NZ32 417 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 MEMO1Q9Y316 297 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 TCAF1Q9Y4C2 921 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 MAD1L1Q9Y6D9 718 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 ANKRD12Q6UB98 2062 aa8.89□□□□□ -0.99
SMAD3-215ENST00000560424 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 GLYATL1P3A0A0U1RQE8 302 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 A0A1B0GX78 115 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 BTN3A3O00478 584 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 PRAMEF2O60811 474 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 WFS1O76024 890 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 HPP00738 406 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 ACPPP15309 386 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 ABOP16442 354 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 PAMP19021 973 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 FDXRP22570 491 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 DNAJA1P31689 397 aaKnown RBP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 SERPINB9P50453 376 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 RAB28P51157 221 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 SRSF11Q05519 484 aaKnown RBP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 LTBQ06643 244 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 MGAT5Q09328 741 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 OLIG2Q13516 323 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 CDSNQ15517 529 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 SLC5A12Q1EHB4 618 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 SIRPB2Q5JXA9 342 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 HP1BP3Q5SSJ5 553 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 LGSNQ5TDP6 509 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 CES4AQ5XG92 561 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 CASC4Q6P4E1 433 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 OVCH1Q7RTY7 1134 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 GALNT7Q86SF2 657 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 SIRT6Q8N6T7 355 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 DDHD1Q8NEL9 900 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 PPHLN1Q8NEY8 458 aaKnown RBP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 OR11G2Q8NGC1 345 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 OR52E1Q8NGJ3 308 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 UHMK1Q8TAS1 419 aaKnown RBP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 FAM76AQ8TAV0 307 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 MZB1Q8WU39 189 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 DCAKDQ8WVC6 231 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 HAS2Q92819 552 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 SDCCAG3Q96C92 435 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 CERS2Q96G23 380 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 CRB3Q9BUF7 120 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 TRABDQ9H4I3 376 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 CNOT10Q9H9A5 744 aaKnown RBP8.88□□□□□ -0.99
SMAD3-215ENST00000560424 FAM60AQ9NP50 221 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 HACD3Q9P035 362 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 TMPRSS11EQ9UL52 423 aa8.88□□□□□ -0.99
SMAD3-215ENST00000560424 NCOA6Q14686 2063 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 NSG1A0A0A6YYJ2 146 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 IQANK1A0A1B0GTG1 560 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 TLDC2A0PJX2 215 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 UGT1A9O60656 530 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 ZWINTO95229 277 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 INHBAP08476 426 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 FOSL1P15407 271 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 UGT1A6P19224 532 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 UGT1A1P22309 533 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 UGT1A4P22310 534 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 HMGCLP35914 325 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 NSG1P42857 185 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 MSH2P43246 934 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 CRADDP78560 199 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 OCA2Q04671 838 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 MYBPHQ13203 477 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 NKG7Q16617 165 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 GPRC6AQ5T6X5 926 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 TRMT10BQ6PF06 316 aaKnown RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 CNSTQ6PJW8 725 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 TIFABQ6ZNK6 161 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 KIAA0408Q6ZU52 694 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 TRIM73Q86UV7 250 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 TRABD2AQ86V40 505 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 EXOC3L1Q86VI1 746 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 SPPL2CQ8IUH8 684 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 GABPB2Q8TAK5 448 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 BRIX1Q8TDN6 353 aaKnown RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 ADAMTS18Q8TE60 1221 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 NINJ1Q92982 152 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 ISL2Q96A47 359 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 ALKBH8Q96BT7 664 aaKnown RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 CFAP36Q96G28 342 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 DCUN1D1Q96GG9 259 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 RMDN2Q96LZ7 410 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 SPSB2Q99619 263 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 CPNE1Q99829 537 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 APOL2Q9BQE5 337 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 MCMBPQ9BTE3 642 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 HGH1Q9BTY7 390 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 TFB2MQ9H5Q4 396 aaKnown RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 XKR8Q9H6D3 395 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 UGT1A7Q9HAW7 530 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms