RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 TUBB4AP04350 444 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 EIF2S1P05198 315 aaKnown RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 PIM1P11309 404 aaPredicted RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 CDH1P12830 882 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 MMP11P24347 488 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 SLC26A3P40879 764 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 BCL6P41182 706 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 SLC6A12P48065 614 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 EFNA3P52797 238 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 SOX8P57073 446 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 RPS15AP62244 130 aaKnown RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 NAB1Q13506 487 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 UBAP2Q5T6F2 1119 aaKnown RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 CAPN13Q6MZZ7 669 aaPredicted RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 TMEM214Q6NUQ4 689 aaKnown RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 C17orf64Q86WR6 236 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 METTL27Q8N6F8 245 aaPredicted RBP13.96□□□□□ -0.17
PSME1-207ENST00000560420 CDKL2Q92772 493 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 PYCR2Q96C36 320 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 HAUS8Q9BT25 410 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 FAM129AQ9BZQ8 928 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 CAB39LQ9H9S4 337 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 GPAMQ9HCL2 828 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 ZNF304Q9HCX3 659 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 P4HTMQ9NXG6 502 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 MAU2Q9Y6X3 613 aa13.96□□□□□ -0.17
PSME1-207ENST00000560420 TNRC6AQ8NDV7 1962 aaKnown RBP13.95□□□□□ -0.18
PSME1-207ENST00000560420 HMX2A2RU54 273 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 TXNDC9O14530 226 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 LCMT2O60294 686 aaKnown RBP13.95□□□□□ -0.18
PSME1-207ENST00000560420 FAM155BO75949 473 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 HIST1H2AGP0C0S8 130 aaPredicted RBP13.95□□□□□ -0.18
PSME1-207ENST00000560420 HIST1H2ADP20671 130 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 OTX2P32243 289 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 STX2P32856 288 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 CASRP41180 1078 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 EFTUD2Q15029 972 aaKnown RBP eCLIP13.95□□□□□ -0.181e-11■■■■□ 26.4
PSME1-207ENST00000560420 TSNQ15631 228 aaKnown RBP13.95□□□□□ -0.18
PSME1-207ENST00000560420 DCAF10Q5QP82 559 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 THEMIS2Q5TEJ8 643 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 ADAMTSL2Q86TH1 951 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 PTRH1Q86Y79 214 aaKnown RBP13.95□□□□□ -0.18
PSME1-207ENST00000560420 FDCSPQ8NFU4 85 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 FBF1Q8TES7 1133 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 ATL1Q8WXF7 558 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 CABS1Q96KC9 395 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 HIST1H2AHQ96KK5 128 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 SMAD5Q99717 465 aaKnown RBP13.95□□□□□ -0.18
PSME1-207ENST00000560420 HIST1H2AJQ99878 128 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 MESP1Q9BRJ9 268 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 H2AFJQ9BTM1 129 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 NUDT9Q9BW91 350 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 TGIF2Q9GZN2 237 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 EPN3Q9H201 632 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 SPNS1Q9H2V7 528 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 ACSS2Q9NR19 701 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 PCDHGB7Q9Y5F8 929 aa13.95□□□□□ -0.18
PSME1-207ENST00000560420 J3QKU1 62 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 AGPSO00116 658 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 KIF2AO00139 706 aaPredicted RBP13.94□□□□□ -0.18
PSME1-207ENST00000560420 PHGDHO43175 533 aaKnown RBP13.94□□□□□ -0.18
PSME1-207ENST00000560420 SLC28A2O43868 658 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 GUCA1CO95843 209 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 ZGLP1P0C6A0 271 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 CD1DP15813 335 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 SAT1P21673 171 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 RRADP55042 308 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 KLC1Q07866 573 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 CDKL4Q5MAI5 379 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 GRTP1Q5TC63 336 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 KIRREL2Q6UWL6 708 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 ATG14Q6ZNE5 492 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 ASB18Q6ZVZ8 466 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 PRSS41Q7RTY9 318 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 CCDC25Q86WR0 208 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 SHISA5Q8N114 240 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 MFSD9Q8NBP5 474 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 NEIL2Q969S2 332 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 RERGQ96A58 199 aaPredicted RBP13.94□□□□□ -0.18
PSME1-207ENST00000560420 RHBDF1Q96CC6 855 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 SLC25A23Q9BV35 468 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 TRIM54Q9BYV2 358 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 DRC3Q9H069 523 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 SOX17Q9H6I2 414 aaPredicted RBP13.94□□□□□ -0.18
PSME1-207ENST00000560420 SEMA3GQ9NS98 782 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 ABCF3Q9NUQ8 709 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 ZNF282Q9UDV7 671 aaPredicted RBP13.94□□□□□ -0.18
PSME1-207ENST00000560420 MAP4K5Q9Y4K4 846 aa13.94□□□□□ -0.18
PSME1-207ENST00000560420 TRBC2A0A5B9 178 aa13.93□□□□□ -0.18
PSME1-207ENST00000560420 FEZF1A0PJY2 475 aa13.93□□□□□ -0.18
PSME1-207ENST00000560420 CTAGE15A4D2H0 777 aa13.93□□□□□ -0.18
PSME1-207ENST00000560420 MASP2O00187 686 aa13.93□□□□□ -0.18
PSME1-207ENST00000560420 NSA2O95478 260 aaKnown RBP13.93□□□□□ -0.18
PSME1-207ENST00000560420 SLC35E2BP0CK96 405 aa13.93□□□□□ -0.18
PSME1-207ENST00000560420 FBLP22087 321 aaKnown RBP13.93□□□□□ -0.18
PSME1-207ENST00000560420 SPRP35270 261 aaPredicted RBP13.93□□□□□ -0.18
PSME1-207ENST00000560420 GGT5P36269 586 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms