RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 EXTL3O43909 919 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 CRCPO75575 148 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 PGLSO95336 258 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 BMP10O95393 424 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 TSHBP01222 138 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 IFNB1P01574 187 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 OPN1MWP04001 364 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 ABHD2P08910 425 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 RAB40ALP0C0E4 278 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 C8orf89P0DMQ9 161 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 OPN1MW2P0DN77 364 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 OPN1MW3P0DN78 364 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 ETS1P14921 441 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 TCF4P15884 667 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 CAMLGP49069 296 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 UCP2P55851 309 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 HNRNPKP61978 463 aaKnown RBP eCLIP3.38□□□□□ -1.87
SPG11-218ENST00000559754 PPP2R2BQ00005 443 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 CDK3Q00526 305 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 PRKCZQ05513 592 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 GFPT1Q06210 699 aaPredicted RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 SLC1A5Q15758 541 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 KIAA1644Q3SXP7 199 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 RAB6CQ53S08 254 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 TEX35Q5T0J7 233 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.38□□□□□ -1.87
SPG11-218ENST00000559754 PSRC1Q6PGN9 363 aaPredicted RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 ANO5Q75V66 913 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 ATG9AQ7Z3C6 839 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 PHLDB2Q86SQ0 1253 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 CCDC190Q86UF4 302 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 FAM219AQ8IW50 185 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 ELMOD2Q8IZ81 293 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 KDM8Q8N371 416 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 C1orf52Q8N6N3 182 aaKnown RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 PAPD5Q8NDF8 572 aaKnown RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 ST6GALNAC6Q969X2 333 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 ERLEC1Q96DZ1 483 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 BSCL2Q96G97 398 aaPredicted RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 PRMT6Q96LA8 375 aaPredicted RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 ZNF599Q96NL3 588 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 KLHL5Q96PQ7 755 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 NAP1L3Q99457 506 aaPredicted RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 FEVQ99581 238 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 RAB6CQ9H0N0 254 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 SRD5A3Q9H8P0 318 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 RNPEPL1Q9HAU8 725 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 SYTL2Q9HCH5 934 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 SLC35D1Q9NTN3 355 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 ECHDC1Q9NTX5 307 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 SLCO1C1Q9NYB5 712 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.38□□□□□ -1.87
SPG11-218ENST00000559754 TRIM10Q9UDY6 481 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 MAD2L2Q9UI95 211 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 TRMT6Q9UJA5 497 aaKnown RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 GMEB2Q9UKD1 530 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 EXOC7Q9UPT5 735 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 NME7Q9Y5B8 376 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 RNF215Q9Y6U7 377 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 FAM205AQ6ZU69 1335 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 NPHP3Q7Z494 1330 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 CLRN2A0PK11 232 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ELOVL7A1L3X0 281 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 KPNA7A9QM74 516 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 O00370 1275 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 MCF2LO15068 1137 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 TTI1O43156 1089 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ARHGEF9O43307 516 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 PALMO75781 387 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 LIPFP07098 398 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 KRT19P08727 400 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 KRT13P13646 458 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 RPA1P27694 616 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 NMBRP28336 390 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 CCND2P30279 289 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 CCND3P30281 292 aaPredicted RBP3.37□□□□□ -1.87
SPG11-218ENST00000559754 PEX19P40855 299 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ARFIP1P53367 373 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 POLR2LP62875 67 aaKnown RBP3.37□□□□□ -1.87
SPG11-218ENST00000559754 IRX1P78414 480 aaPredicted RBP3.37□□□□□ -1.87
SPG11-218ENST00000559754 TNK1Q13470 666 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 DPYSQ14117 519 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 MELKQ14680 651 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 MVPQ14764 893 aaKnown RBP3.37□□□□□ -1.87
SPG11-218ENST00000559754 IQCCQ4KMZ1 466 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 CEP55Q53EZ4 464 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 NDUFAF5Q5TEU4 345 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 FAAP20Q6NZ36 180 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ZCCHC12Q6PEW1 402 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ZNF790Q6PG37 636 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ENPP7Q6UWV6 458 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 TOM1L2Q6ZVM7 507 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ZNF410Q86VK4 478 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 CCDC83Q8IWF9 413 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 FBXW8Q8N3Y1 598 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 SPEM1Q8N4L4 309 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ZNF611Q8N823 705 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 MAPK1IP1LQ8NDC0 245 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 DDHD1Q8NEL9 900 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 UBLCP1Q8WVY7 318 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms