RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 KLC1Q07866 573 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 ILF2Q12905 390 aaKnown RBP20.44■□□□□ 0.86
CRNDE-205ENST00000558952 DUPD1Q68J44 220 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 ZC3HC1Q86WB0 502 aaKnown RBP20.44■□□□□ 0.86
CRNDE-205ENST00000558952 NKAPQ8N5F7 415 aaKnown RBP20.44■□□□□ 0.86
CRNDE-205ENST00000558952 TM9SF4Q92544 642 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 CDKL2Q92772 493 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 THAP11Q96EK4 314 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 PDLIM5Q96HC4 596 aaKnown RBP20.44■□□□□ 0.86
CRNDE-205ENST00000558952 VPS39Q96JC1 886 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 SGPP1Q9BX95 441 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 MFRPQ9BY79 579 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 SYNPO2LQ9H987 977 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 SAYSD1Q9NPB0 183 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 SLAMF7Q9NQ25 335 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 C14orf105Q9NVL8 296 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 PLAAQ9Y263 795 aa20.44■□□□□ 0.86
CRNDE-205ENST00000558952 UTP11Q9Y3A2 253 aaKnown RBP20.44■□□□□ 0.86
CRNDE-205ENST00000558952 TNRC6AQ8NDV7 1962 aaKnown RBP20.43■□□□□ 0.86
CRNDE-205ENST00000558952 EIF3HO15372 352 aaKnown RBP eCLIP20.43■□□□□ 0.86
CRNDE-205ENST00000558952 P2RX6O15547 441 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 ZNF37AP17032 561 aaPredicted RBP20.43■□□□□ 0.86
CRNDE-205ENST00000558952 AVPR1BP47901 424 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 SLC12A2P55011 1212 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 SOX8P57073 446 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 CSNK1G2P78368 415 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 CBLBQ13191 982 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 FAM53BQ14153 422 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 VWA2Q5GFL6 755 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 JMJD6Q6NYC1 403 aaPredicted RBP20.43■□□□□ 0.86
CRNDE-205ENST00000558952 KIRREL2Q6UWL6 708 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 RAB17Q9H0T7 212 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 MKKSQ9NPJ1 570 aaPredicted RBP20.43■□□□□ 0.86
CRNDE-205ENST00000558952 TXNDC16Q9P2K2 825 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 C3orf18Q9UK00 162 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 PCM1Q15154 2024 aa20.43■□□□□ 0.86
CRNDE-205ENST00000558952 IGLV3-12A0A075B6K2 115 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 KCNE1BA0A087WTH5 132 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 A0A0A6YYC8 382 aaPredicted RBP20.42■□□□□ 0.86
CRNDE-205ENST00000558952 I3L1I5 382 aaPredicted RBP20.42■□□□□ 0.86
CRNDE-205ENST00000558952 MASP2O00187 686 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 MAP2K7O14733 419 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 GUCA1CO95843 209 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 ACPPP15309 386 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 CAMKVQ8NCB2 501 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 CPT1CQ8TCG5 803 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 PNPLA2Q96AD5 504 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 MIB2Q96AX9 1013 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 FBXL8Q96CD0 374 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 FAM129AQ9BZQ8 928 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 RHOJQ9H4E5 214 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 ZNF552Q9H707 407 aaPredicted RBP20.42■□□□□ 0.86
CRNDE-205ENST00000558952 NOVA2Q9UNW9 492 aaKnown RBP20.42■□□□□ 0.86
CRNDE-205ENST00000558952 MAP4K5Q9Y4K4 846 aa20.42■□□□□ 0.86
CRNDE-205ENST00000558952 STATHP02808 62 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 CDH1P12830 882 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 NPPBP16860 134 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 CXCR2P25025 360 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 SLC26A3P40879 764 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 EMP2P54851 167 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 SLC6A19Q695T7 634 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 TBC1D19Q8N5T2 526 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 RBMXL3Q8N7X1 1067 aaKnown RBP20.41■□□□□ 0.86
CRNDE-205ENST00000558952 OR11G2Q8NGC1 345 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 OR56A3Q8NH54 315 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 PYCR2Q96C36 320 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 SH2B3Q9UQQ2 575 aa20.41■□□□□ 0.86
CRNDE-205ENST00000558952 FEZF1A0PJY2 475 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 FFAR3O14843 346 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 GPR42O15529 346 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 FOXS1O43638 330 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 ALOX12BO75342 701 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 VPS4BO75351 444 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 SORBS2O94875 1100 aaKnown RBP20.4■□□□□ 0.86
CRNDE-205ENST00000558952 HEXBP07686 556 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 SSTR1P30872 391 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 CCR8P51685 355 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 TAS2R39P59534 338 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 CAV1Q03135 178 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 ZNF460Q14592 562 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 SBSNQ6UWP8 590 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 TMEM207Q6UWW9 146 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 FRA10AC1Q70Z53 315 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 VN1R4Q7Z5H5 301 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 ASPGQ86U10 573 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 PARP9Q8IXQ6 854 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 ZADH2Q8N4Q0 377 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 ARHGEF39Q8N4T4 335 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 AMER3Q8N944 861 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 ANKRD7Q92527 254 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 POPDC3Q9HBV1 291 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 GPAMQ9HCL2 828 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 LUZP4Q9P127 313 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 CCDC88CQ9P219 2028 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 MED13Q9UHV7 2174 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 VPS4AQ9UN37 437 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 TENM4Q6N022 2769 aa20.4■□□□□ 0.86
CRNDE-205ENST00000558952 IDSB3KWA1 339 aa20.39■□□□□ 0.85
CRNDE-205ENST00000558952 H0YIG0 161 aa20.39■□□□□ 0.85
CRNDE-205ENST00000558952 HPP00738 406 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms