RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 KIAA1191Q96A73 305 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 TMEM79Q9BSE2 394 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 PCBD2Q9H0N5 130 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ANKMY1Q9P2S6 941 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 KCND3Q9UK17 655 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 RUVBL1Q9Y265 456 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 MRPS2Q9Y399 296 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 PCDHGA6Q9Y5G7 932 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 FITM1A5D6W6 292 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 C21orf140B9A014 251 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 FFAR3O14843 346 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 GPR42O15529 346 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 PRB1P04280 392 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 LTA4HP09960 611 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 BCL6P41182 706 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 SLC6A12P48065 614 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 HSPA7P48741 367 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 CDKL1Q00532 357 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 CDC20Q12834 499 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 ILF2Q12905 390 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 IL10RAQ13651 578 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 NKAIN1Q4KMZ8 207 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 TRMT10CQ7L0Y3 403 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 VN1R4Q7Z5H5 301 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 TBC1D1Q86TI0 1168 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 CSNK1A1LQ8N752 337 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 EXD3Q8N9H8 876 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 SLC5A11Q8WWX8 675 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 MOCOSQ96EN8 888 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 C10orf90Q96M02 699 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 GPR78Q96P69 363 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 CD274Q9NZQ7 290 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 TLK1Q9UKI8 766 aa13.19□□□□□ -0.3
TSPAN3-205ENST00000558745 EXOC1LA0A1B0GW35 172 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 A0A1B0GX78 115 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 FOXO6A8MYZ6 492 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 UBXN8O00124 270 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 DSCR3O14972 297 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 WDR47O94967 919 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 CCND1P24385 295 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 ARSFP54793 590 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 RHDQ02161 417 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 NCF4Q15080 339 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 SHISA6Q6ZSJ9 500 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 COX15Q7KZN9 410 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 STAG3L4Q8TBR4 150 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 ATOH8Q96SQ7 321 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 HAUS8Q9BT25 410 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 GPR87Q9BY21 358 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 SEMA4CQ9C0C4 833 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 NMRAL1Q9HBL8 299 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 WWOXQ9NZC7 414 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 SRPK3Q9UPE1 567 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 DYRK1BQ9Y463 629 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 IKBKGQ9Y6K9 419 aa13.18□□□□□ -0.3
TSPAN3-205ENST00000558745 A0A087X1B8 175 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 FOXS1O43638 330 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 OR1F1O43749 312 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 PRAMEF4O60810 478 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 KLF7O75840 302 aaPredicted RBP13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 SHBGP04278 402 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 ABHD2P08910 425 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 FAM87AP0C7U9 286 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 HRH2P25021 359 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 AGTR2P50052 363 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 HNMTP50135 292 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 SERPINB8P50452 374 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 CCR8P51685 355 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 VSNL1P62760 191 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 PRAMEF9Q5VWM5 478 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 NXPE4Q6UWF7 544 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 PRSS41Q7RTY9 318 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 TMPRSS11BQ86T26 416 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 ARHGEF39Q8N4T4 335 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 KCT2Q8NC54 265 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 ABHD11Q8NFV4 315 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 OR4K1Q8NGD4 311 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 RERGQ96A58 199 aaPredicted RBP13.17□□□□□ -0.3
TSPAN3-205ENST00000558745 DHRS4Q9BTZ2 278 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms