RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 LRRD1A4D1F6 860 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 C3orf70A6NLC5 250 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-206ENST00000558739 C2orf81A6NN90 581 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 FAM166BA8MTA8 275 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 NDC80O14777 642 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 PPP1R12AO14974 1030 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-206ENST00000558739 PEX1O43933 1283 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 ANXA5P08758 320 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 SKILP12757 684 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 KDELR1P24390 212 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 HADHQ16836 314 aaKnown RBP11.12□□□□□ -0.63
SMAD3-206ENST00000558739 SYTL3Q4VX76 610 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 FBXO42Q6P3S6 717 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
SMAD3-206ENST00000558739 MDGA2Q7Z553 956 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
SMAD3-206ENST00000558739 ZNF567Q8N184 647 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 C16orf52Q8NHV5 167 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 TSLPQ969D9 159 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 TRIM11Q96F44 468 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 ERGIC2Q96RQ1 377 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 CNPPD1Q9BV87 410 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 RBCK1Q9BYM8 510 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 DEPPQ9NTK1 212 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 SMARCAL1Q9NZC9 954 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 HCN3Q9P1Z3 774 aa11.12□□□□□ -0.63
SMAD3-206ENST00000558739 NBEAL2Q6ZNJ1 2754 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 DSCAMO60469 2012 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 A0A1W2PPV9 198 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 OR2A25A4D2G3 310 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 TARM1B6A8C7 271 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 APOL1O14791 398 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 PHF1O43189 567 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 ARHGEF9O43307 516 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 PECAM1P16284 738 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 CYB561P49447 251 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 MSLNQ13421 630 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 SFT2D3Q587I9 215 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 TAS2R42Q7RTR8 314 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 APTXQ7Z2E3 356 aaKnown RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 RPS19BP1Q86WX3 136 aaKnown RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 LGI4Q8N135 537 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 ZFP62Q8NB50 900 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 POGLUT1Q8NBL1 392 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 NAXEQ8NCW5 288 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 OR9A4Q8NGU2 314 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 M1APQ8TC57 530 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 LKAAEAR1Q8TD35 194 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 KIAA1191Q96A73 305 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 ZUFSPQ96AP4 578 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 SLC22A18Q96BI1 424 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 MVB12AQ96EY5 273 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 PERPQ96FX8 193 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 ACAT2Q9BWD1 397 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 FSD1LQ9BXM9 530 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 DRC3Q9H069 523 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 CDC14AQ9UNH5 594 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 RUVBL2Q9Y230 463 aaKnown RBP11.11□□□□□ -0.63
SMAD3-206ENST00000558739 KLK4Q9Y5K2 254 aa11.11□□□□□ -0.63
SMAD3-206ENST00000558739 CR1P17927 2039 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 IGKV1-8A0A0C4DH67 115 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 KDM4EB2RXH2 506 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 MYO1FO00160 1098 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 SYT5O00445 386 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 PRPF4O43172 522 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 CDC123O75794 336 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 HRGP04196 525 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 CYP1A2P05177 515 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 CCDC172P0C7W6 258 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 TNNT3P45378 269 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 BDKRB1P46663 353 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 WNT3P56703 355 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 USP10Q14694 798 aaKnown RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 EXT1Q16394 746 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 DCUN1D3Q8IWE4 304 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 OR2A1Q8NGT9 310 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 HEXDCQ8WVB3 486 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 SPATA13Q96N96 652 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 FCRL5Q96RD9 977 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 DPH7Q9BTV6 452 aa11.1□□□□□ -0.63
SMAD3-206ENST00000558739 TRIM45Q9H8W5 580 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 KLHL8Q9P2G9 620 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 KLF13Q9Y2Y9 288 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-206ENST00000558739 NCKAP5O14513 1909 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 PRKDCP78527 4128 aaKnown RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 OR51F1A6NGY5 319 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 TUBAL3A6NHL2 446 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 FIGNL2A6NMB9 653 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 KCNAB3O43448 404 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms