RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 FBXL22Q6P050 247 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 PAQR3Q6TCH7 311 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CYP20A1Q6UW02 462 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 FAM92BQ6ZTR7 304 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 MAMDC2Q7Z304 686 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 PRSS42Q7Z5A4 293 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 NECAB2Q7Z6G3 386 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 DEFB132Q7Z7B7 95 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SLC9B2Q86UD5 537 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CDH24Q86UP0 819 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 IGFN1Q86VF2 1251 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SLC30A8Q8IWU4 369 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 RIMKLAQ8IXN7 391 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CMTR2Q8IYT2 770 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 PGBD3Q8N328 593 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CBARPQ8N350 705 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SPATA6LQ8N4H0 392 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 KLHL36Q8N4N3 616 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 FAM156AQ8NDB6 213 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 OR7G3Q8NG95 312 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 OR10T2Q8NGX3 314 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SCAMP5Q8TAC9 235 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 ZNF461Q8TAF7 563 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 HMGCLL1Q8TB92 370 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 DNAJB14Q8TBM8 379 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CSGALNACT1Q8TDX6 532 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 AKAP1Q92667 903 aaKnown RBP eCLIP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 FOXJ1Q92949 421 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 EXT2Q93063 718 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 PTP4A1Q93096 173 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 FAM162AQ96A26 154 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 LINGO1Q96FE5 620 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 HIST1H2AHQ96KK5 128 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 HIST1H2AJQ99878 128 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 ADAM2Q99965 735 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TCF25Q9BQ70 676 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TMEM246Q9BRR3 403 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TCEAL7Q9BRU2 100 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 H2AFJQ9BTM1 129 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 HTATIP2Q9BUP3 242 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 THUMPD3Q9BV44 507 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 NTMT1Q9BV86 223 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 ZNF416Q9BWM5 594 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TTLL2Q9BWV7 592 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 ZCCHC2Q9C0B9 1178 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TWSG1Q9GZX9 223 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 GABARAPL1Q9H0R8 117 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CXCL16Q9H2A7 254 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 ATXN3LQ9H3M9 355 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 NOL6Q9H6R4 1146 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 RPF2Q9H7B2 306 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 PDFQ9HBH1 243 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CRLF2Q9HC73 371 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SPON1Q9HCB6 807 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TM9SF3Q9HD45 589 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 MRPS30Q9NP92 439 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SEMA4BQ9NPR2 832 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SMPD4Q9NXE4 827 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 WWOXQ9NZC7 414 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 GLTPQ9NZD2 209 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 MPP6Q9NZW5 540 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 OPTCQ9UBM4 332 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 CYB5R1Q9UHQ9 305 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SH3BGRL2Q9UJC5 107 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 GJD2Q9UKL4 321 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 PCOLCE2Q9UKZ9 415 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 AGO1Q9UL18 857 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 ZFR2Q9UPR6 939 aaKnown RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 OARD1Q9Y530 152 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TIMM13Q9Y5L4 95 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 MAGED1Q9Y5V3 778 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 AUP1Q9Y679 476 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 A3GALT2U3KPV4 340 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 TRIP12Q14669 1992 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-207ENST00000558335 SCN8AQ9UQD0 1980 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 GREB1Q4ZG55 1949 aa5.35□□□□□ -1.55
GABPB1-207ENST00000558335 A0A096LPI6 279 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 PNMA8CA0A1B0GUJ8 204 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 ATP6AP2A0A1C7CYW4 349 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 PIPSLA2A3N6 862 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 OR6C74A6NCV1 312 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 FAM170BA6NMN3 283 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 C12orf71A8MTZ7 269 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 ANKRD66B4E2M5 251 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 J3KR12 359 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 M0R3G1 203 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 TOR1BO14657 336 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 ABCD4O14678 606 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 WNT9AO14904 365 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 PCDH17O14917 1159 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 SEPT4O43236 478 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 TLR5O60602 858 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 UGDHO60701 494 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 SOCS5O75159 536 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 NDUFS2O75306 463 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 TRIM3O75382 744 aaPredicted RBP5.34□□□□□ -1.55
GABPB1-207ENST00000558335 ATP6AP2O75787 350 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 CDC123O75794 336 aaPredicted RBP5.34□□□□□ -1.55
GABPB1-207ENST00000558335 SEMA3DO95025 777 aa5.34□□□□□ -1.55
GABPB1-207ENST00000558335 LDOC1O95751 146 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms