RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 VPS29Q9UBQ0 182 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SF3B1O75533 1304 aaKnown RBP eCLIP3.59□□□□□ -1.834e-12■■■■■ 275.7
ATXN3-248ENST00000558190 POLEQ07864 2286 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 BORCS7-ASMTA0A0B4J1R7 106 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ADAM12O43184 909 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PBX3P40426 434 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NRG3P56975 720 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PFKPQ01813 784 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 HOXC11O43248 304 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 GRIN3BO60391 1043 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 IFNGP01579 166 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TFPIP10646 304 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AKR1C4P17516 323 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PTPRAP18433 802 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AVPI1Q5T686 147 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TSTD2Q5T7W7 516 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TBPL2Q6SJ96 375 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 BEST3Q8N1M1 668 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 GPR152Q8TDT2 470 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TMEM159Q96B96 161 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZBTB8AQ96BR9 441 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TNFSF13BQ9Y275 285 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TSPAN15O95858 294 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CPB1P15086 417 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CLCN7P51798 805 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DIO3P55073 304 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CAPSQ13938 189 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SDHAF4Q5VUM1 108 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ANKRD54Q6NXT1 300 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZMYM2Q9UBW7 1377 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 LOC105369274A0A096LPK9 316 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 STK25O00506 426 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AXLP30530 894 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DGKGP49619 791 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AFF3P51826 1226 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 MAXP61244 160 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 XYLT1Q86Y38 959 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 OR4N4Q8N0Y3 316 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 LINGO1Q96FE5 620 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 BRINP2Q9C0B6 783 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PTPRZ1P23471 2315 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SEPT4O43236 478 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 VAMP1P23763 118 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ADH6P28332 368 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ARL2P36404 184 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AP1S1P61966 158 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TOR1AIP1Q5JTV8 583 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ARHGAP40Q5TG30 622 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZER1Q7Z7L7 766 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AQP11Q8NBQ7 271 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 MASTLQ96GX5 879 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DOHHQ9BU89 302 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 KCNJ16Q9NPI9 418 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CFAP97Q9P2B7 532 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SBK2P0C263 348 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TYMPP19971 482 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DPP6P42658 865 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ATG9BQ674R7 924 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SHKBP1Q8TBC3 707 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NXF3Q9H4D5 531 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 POLR3HQ9Y535 204 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NFASCO94856 1347 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PTPRQQ9UMZ3 2332 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 CIB4A0PJX0 185 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 PTPN6P29350 595 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 CCND3P30281 292 aaPredicted RBP3.59□□□□□ -1.84
ATXN3-248ENST00000558190 PITPNBP48739 271 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 NLRP8Q86W28 1048 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ZFP41Q8N8Y5 198 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF680Q8NEM1 530 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 RETREG1Q9H6L5 497 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 SMARCA4P51532 1647 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 S1PR4O95977 384 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 UNGP13051 313 aaPredicted RBP3.59□□□□□ -1.84
ATXN3-248ENST00000558190 RABGGTBP53611 331 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 CDNFQ49AH0 187 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 HLA-DQA1Q5Y7H0 255 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ZPBP2Q6X784 338 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 REM2Q8IYK8 340 aaPredicted RBP3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ARL14Q8N4G2 192 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 C15orf40Q8WUR7 153 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 GPR21Q99679 349 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ZBTB26Q9HCK0 441 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 POLLQ9UGP5 575 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 FBXL2Q9UKC9 423 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 POM121CA8CG34 1229 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 KRBOX1C9JBD0 128 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 OR56A5P0C7T3 313 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF20P17024 532 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF26P17031 533 aaPredicted RBP3.59□□□□□ -1.84
ATXN3-248ENST00000558190 TAL1P17542 331 aaPredicted RBP3.59□□□□□ -1.84
ATXN3-248ENST00000558190 TAF6P49848 677 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 ERVK-21P61565 698 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 CXADRP78310 365 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 CFAP52Q8N1V2 620 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 VWA5B2Q8N398 1253 aa3.59□□□□□ -1.84
ATXN3-248ENST00000558190 TWIST2Q8WVJ9 160 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms