RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CAPN2P17655 700 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 RBMS1P29558 406 aaKnown RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 PDHA2P29803 388 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 TLX1P31314 330 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 HSPA4P34932 840 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 SOX3P41225 446 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 IRX4P78413 519 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 RBPJQ06330 500 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 AIMP1Q12904 312 aaKnown RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 ILF2Q12905 390 aaKnown RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 FGD3Q5JSP0 725 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 C1QTNF12Q5T7M4 302 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 CST9LP1Q5W188 147 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 KRT80Q6KB66 452 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 LCLAT1Q6UWP7 414 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 MAML2Q8IZL2 1156 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 AMER3Q8N944 861 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 TDRD5Q8NAT2 981 aaKnown RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 KCTD6Q8NC69 237 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 PRSS33Q8NF86 280 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 OR6J1Q8NGC5 347 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 C9orf43Q8TAL5 461 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 PIK3R3Q92569 461 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 SPSB1Q96BD6 273 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 ATXN7L3BQ96GX2 97 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 C2orf48Q96LS8 159 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 ZNF558Q96NG5 402 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 BTBD9Q96Q07 612 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 GAL3ST4Q96RP7 486 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 LGMNQ99538 433 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 SOSTQ9BQB4 213 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 ANP32EQ9BTT0 268 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 RAB11FIP5Q9BXF6 653 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 TRIM6Q9C030 488 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 RNF121Q9H920 327 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 ISY1Q9ULR0 285 aaKnown RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 WIPI2Q9Y4P8 454 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 COL5A2P05997 1499 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 LOC105371242A0A075B767 164 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 A0A1W2PPK0 400 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 SLC1A7O00341 560 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 SURF4O15260 269 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 OR52Z1P0C646 297 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 FAM200BP0CF97 657 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 ACHEP22303 614 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 AADACP22760 399 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 HSD17B3P37058 310 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 CAPGP40121 348 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 OR3A2P47893 321 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 CSRP3P50461 194 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 DCDC1P59894 354 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 DHODHQ02127 395 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 PAX8Q06710 450 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 RASGEF1BQ0VAM2 473 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 FAM189A2Q15884 450 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 CRY2Q49AN0 593 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 ZNF343Q6P1L6 599 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 CDC20BQ86Y33 519 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 TCEANCQ8N8B7 351 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 CCDC89Q8N998 374 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 XXYLT1Q8NBI6 393 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 OR4C15Q8NGM1 316 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 RSPH1Q8WYR4 309 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 CNRIP1Q96F85 164 aaPredicted RBP2.8□□□□□ -1.96
SPG11-206ENST00000558093 PGAP3Q96FM1 320 aaPredicted RBP2.8□□□□□ -1.96
SPG11-206ENST00000558093 GTPBP2Q9BX10 602 aaKnown RBP2.8□□□□□ -1.96
SPG11-206ENST00000558093 MTHFD2LQ9H903 347 aaPredicted RBP2.8□□□□□ -1.96
SPG11-206ENST00000558093 GPN1Q9HCN4 374 aaPredicted RBP2.8□□□□□ -1.96
SPG11-206ENST00000558093 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.8□□□□□ -1.96
SPG11-206ENST00000558093 PRDM4Q9UKN5 801 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 NOL7Q9UMY1 257 aaKnown RBP2.8□□□□□ -1.96
SPG11-206ENST00000558093 CSAG2Q9Y5P2 127 aa2.8□□□□□ -1.96
SPG11-206ENST00000558093 A8MXK9 166 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 C2CD4DB7Z1M9 353 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 CCL24O00175 119 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ATP6AP2O75787 350 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 CEACAM4O75871 244 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 IGHV3-13P01766 116 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 STAG3L1P0CL83 205 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ERCC2P18074 760 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 IL11P20809 199 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 GATA2P23769 480 aaPredicted RBP2.79□□□□□ -1.96
SPG11-206ENST00000558093 ALDH1B1P30837 517 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 SFTPDP35247 375 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 NOVP48745 357 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 LIMK1P53667 647 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 UBASH3AP57075 661 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 DLK1P80370 383 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 RIGQ13278 110 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 TOMM20Q15388 145 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ALDH1L2Q3SY69 923 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ZNF774Q6NX45 483 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ENPP7Q6UWV6 458 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 RBPMS2Q6ZRY4 209 aaKnown RBP2.79□□□□□ -1.96
SPG11-206ENST00000558093 RCOR2Q8IZ40 523 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ABCA7Q8IZY2 2146 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 Q8N377 158 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 LRTM2Q8N967 370 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 CCDC63Q8NA47 563 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms