RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RAD9AQ99638 391 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CLSTN3Q9BQT9 956 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 NUAK2Q9H093 628 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 ABCG8Q9H221 673 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 OR51E2Q9H255 320 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CWH43Q9H720 699 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 IL26Q9NPH9 171 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PRDM8Q9NQV8 689 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 FAM120CQ9NX05 1096 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 GLYATL1P3A0A0U1RQE8 302 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 LOC110117498-PIK3R3F6TDL0 507 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 COX7A2P14406 83 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CSTF3Q12996 717 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 UGT8Q16880 541 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 ARMCX4Q5H9R4 360 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 AGAP6Q5VW22 663 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF605Q86T29 641 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 TCAIMQ8N3R3 496 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PIK3R3Q92569 461 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CRELD1Q96HD1 420 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 AGAP4Q96P64 663 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CHCHD6Q9BRQ6 235 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 SPATA9Q9BWV2 254 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 EBPLQ9BY08 206 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 EHD3Q9NZN3 535 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 AFF4Q9UHB7 1163 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 FCF1Q9Y324 198 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 AP1M2Q9Y6Q5 423 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 DNAH12Q6ZR08 3092 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PLK4O00444 970 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 SCN2BO60939 215 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 VNN2O95498 520 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 KLKB1P03952 638 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ADORA3P0DMS8 318 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ETV6P41212 452 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 PXNP49023 591 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 RGS6P49758 472 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 WNT3P56703 355 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 AP1S1P61966 158 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 KCNJ10P78508 379 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TEKQ02763 1124 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 GPR33Q49SQ1 333 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 GPR155Q7Z3F1 870 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 L3MBTL4Q8NA19 623 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TRPV1Q8NER1 839 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 FEVQ99581 238 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TTPALQ9BTX7 342 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 QPCTLQ9NXS2 382 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 NPAP1Q9NZP6 1156 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 PADI2Q9Y2J8 665 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 CAB39Q9Y376 341 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 PCDHB11Q9Y5F2 797 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 LYVE1Q9Y5Y7 322 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TNFRSF11BO00300 401 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 KMOO15229 486 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ZW10O43264 779 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 IDH3BO43837 385 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 KRT75O95678 551 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 STSP08842 583 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 IDH2P48735 452 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 NUDT6P53370 316 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 SMARCB1Q12824 385 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 EIF4HQ15056 248 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 CHRNA6Q15825 494 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ADGRF1Q5T601 910 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 C10orf62Q5T681 223 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 C9orf131Q5VYM1 1079 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 FRG2Q64ET8 278 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF783Q6ZMS7 281 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 UBE2R2Q712K3 238 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 FAM124AQ86V42 546 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ADGRG2Q8IZP9 1017 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 NXPE1Q8N323 547 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 IL17RDQ8NFM7 739 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 Q96MT0 163 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 FRG2BQ96QU4 278 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 C19orf43Q9BQ61 176 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 CENPOQ9BU64 300 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TTLL2Q9BWV7 592 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 OR2B2Q9GZK3 357 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 RNF167Q9H6Y7 350 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TPT1P8Q9HAU6 139 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ITM2CQ9NQX7 267 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 TRMT13Q9NUP7 481 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 GPR83Q9NYM4 423 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF221Q9UK13 617 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 KLK4Q9Y5K2 254 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 NOX1Q9Y5S8 564 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF106Q9H2Y7 1883 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 SCN8AQ9UQD0 1980 aa11.43□□□□□ -0.58
VIPAS39-211ENST00000557658 SERTM1A2A2V5 107 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ADAMDEC1O15204 470 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 AOC2O75106 756 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 STC2O76061 302 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 IGHA2P01877 340 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 HIST1H2AGP0C0S8 130 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 BPIP17213 487 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms