RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CAPN1P07384 714 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 ABHD2P08910 425 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 LTA4HP09960 611 aaKnown RBP11.93□□□□□ -0.5
SLIRP-211ENST00000557623 SLC35E2BP0CK96 405 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CNTFP26441 200 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 MSH2P43246 934 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 SERPINB8P50452 374 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CCR8P51685 355 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 PMS2P54278 862 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CSNK1G2P78368 415 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 ERV3-1Q14264 604 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 TGFBIQ15582 683 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 TBR1Q16650 682 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 UGT8Q16880 541 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 NKAIN1Q4KMZ8 207 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 TEX35Q5T0J7 233 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 GARNL3Q5VVW2 1013 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 MLIPQ5VWP3 458 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 PRMT9Q6P2P2 845 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CNPY4Q8N129 248 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 TBC1D19Q8N5T2 526 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CSNK1A1LQ8N752 337 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 ABHD11Q8NFV4 315 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 THAP4Q8WY91 577 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CABS1Q96KC9 395 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 PAFAH2Q99487 392 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
SLIRP-211ENST00000557623 STARD5Q9NSY2 213 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 ZNF180Q9UJW8 692 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 TCFL5Q9UL49 500 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 RNF112Q9ULX5 631 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 POLHQ9Y253 713 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 KCNE2Q9Y6J6 123 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 NUP210LQ5VU65 1888 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CDC14CA4D256 554 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 EIF4E1BA6NMX2 242 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 POC1B-GALNT4F8VUJ3 575 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 KRT38O76015 456 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 ALBP02768 609 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SFTPCP11686 197 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 CDH1P12830 882 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 TYK2P29597 1187 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 CCR10P46092 362 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 RPS18P62269 152 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 BMPR2Q13873 1038 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 NDUFA9Q16795 377 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 FAM83EQ2M2I3 478 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 ZXDCQ2QGD7 858 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 UBAP2Q5T6F2 1119 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 LGSNQ5TDP6 509 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SULT1C3Q6IMI6 304 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 THOC6Q86W42 341 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 KLHDC8AQ8IYD2 350 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SPATA6LQ8N4H0 392 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 LRRN4CLQ8ND94 238 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 OR4K1Q8NGD4 311 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SLC5A11Q8WWX8 675 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 EXTL1Q92935 676 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 FKBP10Q96AY3 582 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 PTERQ96BW5 349 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 RHBDF1Q96CC6 855 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 MVB12AQ96EY5 273 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 OR4K3Q96R72 315 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 RUFY1Q96T51 708 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 CAPS2Q9BXY5 557 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 UNKQ9C0B0 810 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 PELI2Q9HAT8 420 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SNX15Q9NRS6 342 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 CD274Q9NZQ7 290 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 RALYQ9UKM9 306 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 CDC14AQ9UNH5 594 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SH2B3Q9UQQ2 575 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 RUVBL1Q9Y265 456 aaKnown RBP11.92□□□□□ -0.5
SLIRP-211ENST00000557623 SLC22A14Q9Y267 594 aa11.92□□□□□ -0.5
SLIRP-211ENST00000557623 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 A0A096LPK6 155 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 HMX2A2RU54 273 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 NCF1BA6NI72 391 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 SYCE1LA8MT33 242 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 NCF1CA8MVU1 366 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 PRPF4O43172 522 aaKnown RBP eCLIP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 RIPK2O43353 540 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 KERAO60938 352 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 WDR47O94967 919 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 C2P06681 752 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 NCF1P14598 390 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 TFEBP19484 476 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 TNFRSF8P28908 595 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 GGT5P36269 586 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 FOLR3P41439 243 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 CSRP3P50461 194 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 OR4D1Q15615 310 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 LINC00303Q3SY05 128 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms