RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MAPKAPK5-AS1Q8N8E1 139 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SMRP1Q8NCR6 262 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FBXO30Q8TB52 745 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SETD6Q8TBK2 473 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SECTM1Q8WVN6 248 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SPDL1Q96EA4 605 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SPATA17Q96L03 361 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 LURAP1Q96LR2 239 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CTAGE1Q96RT6 745 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RAD9AQ99638 391 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TRMT61BQ9BVS5 477 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 LAT2Q9GZY6 243 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CSTL1Q9H114 145 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZSCAN16Q9H4T2 348 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 LIN28AQ9H9Z2 209 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MYNNQ9NPC7 610 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 INIPQ9NRY2 104 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ERAP1Q9NZ08 941 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 UBAP1Q9NZ09 502 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RASAL2Q9UJF2 1139 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF580Q9UK33 172 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CFL2Q9Y281 166 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZFP37Q9Y6Q3 630 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TTC21AQ8NDW8 1320 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 UQCRHLA0A096LP55 91 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MSGN1A6NI15 193 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ERVV-2B6SEH9 535 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FAM72CH0Y354 149 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 POLR3GO15318 223 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RPS6KA5O75582 802 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TSHBP01222 138 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ASGR1P07306 291 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 UQCRHP07919 91 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RETP07949 1114 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 OR52Z1P0C646 297 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 HSPA8P11142 646 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 EEF2P13639 858 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 PLA2G2AP14555 144 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MSH3P20585 1137 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 IL10P22301 178 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 AXLP30530 894 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SH3BGRP55822 239 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 POLR2GP62487 172 aaKnown RBP eCLIP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SCN1BQ07699 218 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CA9Q16790 459 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TECRLQ5HYJ1 363 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FAM72AQ5TYM5 149 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FAM72DQ6L9T8 149 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TRAT1Q6PIZ9 186 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CNSTQ6PJW8 725 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF852Q6ZMS4 543 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C3orf62Q6ZUJ4 267 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C11orf57Q6ZUT1 292 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SPATA19Q7Z5L4 167 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 GPR142Q7Z601 462 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 DSG4Q86SJ6 1040 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FAM72BQ86X60 149 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CD302Q8IX05 232 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MAB21L3Q8N8X9 362 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF565Q8N9K5 539 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 POC1AQ8NBT0 407 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 OR52K1Q8NGK4 314 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RPRD1AQ96P16 312 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 GAL3ST1Q99999 423 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MGME1Q9BQP7 344 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 PANK2Q9BZ23 570 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF350Q9GZX5 532 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SEMA6AQ9H2E6 1030 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 DCTPP1Q9H773 170 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C8orf33Q9H7E9 229 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C12orf10Q9HB07 376 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MRGBPQ9NV56 204 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FKBP14Q9NWM8 211 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ELF5Q9UKW6 265 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 DISP3Q9P2K9 1392 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 NLRP1Q9C000 1473 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 IGHV4-61A0A0C4DH41 118 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 K7EPI3 171 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 L7N2F9 121 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RNF103O00237 685 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 P2RY10O00398 339 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 NDUFA2O43678 99 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SLCO2B1O94956 709 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 BMP10O95393 424 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 BCL10O95999 233 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 IGHV4-59P01825 116 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CHRNA1P02708 482 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RPSAP08865 295 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 HAPLN1P10915 354 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MT3P25713 68 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 RFC2P35250 354 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 WNT5AP41221 380 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MAGEA9P43362 315 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 IER3P46695 156 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 VAMP7P51809 220 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 SLC26A5P58743 744 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 B3GALT5-AS1P59052 145 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 DSTNP60981 165 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 POLR2FP61218 127 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CX3CL1P78423 397 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms