RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FKBP10Q96AY3 582 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 PTERQ96BW5 349 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 RHBDF1Q96CC6 855 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 MVB12AQ96EY5 273 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 OR4K3Q96R72 315 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 RUFY1Q96T51 708 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 CAPS2Q9BXY5 557 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 UNKQ9C0B0 810 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 PELI2Q9HAT8 420 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SNX15Q9NRS6 342 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 CD274Q9NZQ7 290 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 RALYQ9UKM9 306 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 CDC14AQ9UNH5 594 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SH2B3Q9UQQ2 575 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 RUVBL1Q9Y265 456 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SLC22A14Q9Y267 594 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 A0A096LPK6 155 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 HMX2A2RU54 273 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 NCF1BA6NI72 391 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 SYCE1LA8MT33 242 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 NCF1CA8MVU1 366 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 PRPF4O43172 522 aaKnown RBP eCLIP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 RIPK2O43353 540 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 KERAO60938 352 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 WDR47O94967 919 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 C2P06681 752 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 NCF1P14598 390 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 TFEBP19484 476 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 TNFRSF8P28908 595 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 GGT5P36269 586 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 FOLR3P41439 243 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 CSRP3P50461 194 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 OR4D1Q15615 310 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 LINC00303Q3SY05 128 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 SOWAHCQ53LP3 525 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 MRPL14Q6P1L8 145 aaKnown RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 KLC3Q6P597 504 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 OVCH1Q7RTY7 1134 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 CAMKVQ8NCB2 501 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 PDPRQ8NCN5 879 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 RHEBL1Q8TAI7 183 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
SLIRP-209ENST00000557342 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 NEIL2Q969S2 332 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 SARGQ9BW04 601 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 ADNPQ9H2P0 1102 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 ALG9Q9H6U8 611 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 ZNF304Q9HCX3 659 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 WWOXQ9NZC7 414 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 NUDT4Q9NZJ9 180 aa11.91□□□□□ -0.5
SLIRP-209ENST00000557342 TRBC2A0A5B9 178 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 FEZF1A0PJY2 475 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.5
SLIRP-209ENST00000557342 KLHL2O95198 593 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 ALDOAP04075 364 aaKnown RBP11.9□□□□□ -0.5
SLIRP-209ENST00000557342 FURINP09958 794 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 FAM153BP0C7A2 387 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 GNAZP19086 355 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 CXCR2P25025 360 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 SLC6A12P48065 614 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 DLG1Q12959 904 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 FAM53BQ14153 422 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 SSPNQ14714 243 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 ACAP2Q15057 778 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 HKDC1Q2TB90 917 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 FAM153CQ494X1 144 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 PCSK4Q6UW60 755 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 NXPE4Q6UWF7 544 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 ASPGQ86U10 573 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 PLD3Q8IV08 490 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 MFSD9Q8NBP5 474 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 DCAKDQ8WVC6 231 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 KCTD4Q8WVF5 259 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 ISL2Q96A47 359 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 COL26A1Q96A83 441 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 C10orf90Q96M02 699 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 TSNARE1Q96NA8 513 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 IP6K3Q96PC2 410 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 AIF1LQ9BQI0 150 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 TXLNGYQ9BZA5 131 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 SLC26A1Q9H2B4 701 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 WDR54Q9H977 334 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 IGSF5Q9NSI5 407 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 GPRC5BQ9NZH0 403 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 NXT1Q9UKK6 140 aaKnown RBP11.9□□□□□ -0.5
SLIRP-209ENST00000557342 MAN2B2Q9Y2E5 1009 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 PTRH2Q9Y3E5 179 aaKnown RBP11.9□□□□□ -0.5
SLIRP-209ENST00000557342 FAM208BQ5VWN6 2430 aa11.9□□□□□ -0.5
SLIRP-209ENST00000557342 SCN3AQ9NY46 2000 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 CLGNO14967 610 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms