RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 GLI2P10070 1586 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 AGAP14A8MT82 685 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ABCB7O75027 752 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CDH8P55286 799 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 FIGNL1Q6PIW4 674 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CMKLR1Q99788 373 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SEMA3CQ99985 751 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM109Q9BVC6 243 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SRRDQ9UH36 339 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TPT1P13693 172 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 DNASE1P24855 282 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ACTR1BP42025 376 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TAS2R30P59541 319 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM205Q6UW68 189 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PARGQ86W56 976 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 GOLM1Q8NBJ4 401 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CELF1Q92879 486 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 RAB39BQ96DA2 213 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CSPG4P5Q96PW8 444 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 NPLQ9BXD5 320 aaPredicted RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 STUB1Q9UNE7 303 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 AP1M2Q9Y6Q5 423 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 NAP1L6A6NFF2 107 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 FADS1O60427 444 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SEC14L2O76054 403 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CCR8P51685 355 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC18A1P54219 525 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 B3GLCTQ6Y288 498 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 OR56A1Q8NGH5 318 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ERLEC1Q96DZ1 483 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CADM1Q9BY67 442 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ARL6Q9H0F7 186 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 OR51V1Q9H2C8 321 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ARHGAP20Q9P2F6 1191 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 C19orf25Q9UFG5 118 aaPredicted RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 H0YAE9 185 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CHRNB1P11230 501 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 AHCYP23526 432 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PITPNBP48739 271 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 NPTX1Q15818 432 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF367Q7RTV3 350 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DPY19L4Q7Z388 723 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ALYREFQ86V81 257 aaKnown RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 GTPBP8Q8N3Z3 284 aaPredicted RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 RNF157Q96PX1 679 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MRPL45Q9BRJ2 306 aaKnown RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 UQCC2Q9BRT2 126 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 USP17L7P0C7H9 530 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DNASE1L3Q13609 305 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CLVS2Q5SYC1 327 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 KDELC1Q6UW63 502 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 IDO2Q6ZQW0 420 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 KCTD9Q7L273 389 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 KIAA0907Q7Z7F0 614 aaPredicted RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SEMA6DQ8NFY4 1073 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 EDEM1Q92611 657 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 HDAC10Q969S8 669 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DOCK7Q96N67 2140 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 BICRAQ9NZM4 1560 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DGKGP49619 791 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PROSER3Q2NL68 480 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM209Q96SK2 561 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 LACRTQ9GZZ8 138 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 HNRNPLP14866 589 aaKnown RBP eCLIP8.61□□□□□ -1.032e-7■■■■□ 25.1
SYNE3-205ENST00000557275 NT5EP21589 574 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SLC29A4Q7RTT9 530 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CHTF18Q8WVB6 975 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM41AQ96HV5 264 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 HDHD5Q9BXW7 423 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MOB1AQ9H8S9 216 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF609O15014 1411 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 AHSA1O95433 338 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 NUDT6P53370 316 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 EEFSECP57772 596 aaKnown RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 KLF10Q13118 480 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DPY19L3Q6ZPD9 716 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 LIX1LQ8IVB5 337 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 APOLD1Q96LR9 279 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 C1orf21Q9H246 121 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DPEP2Q9H4A9 486 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 KCNJ16Q9NPI9 418 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 FTCDNL1E5RQL4 147 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ESR1P03372 595 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TAS2R39P59534 338 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ERVK-8P63133 956 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 FAM174BQ3ZCQ3 159 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SLC22A25Q6T423 547 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 METTL4Q8N3J2 472 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PROKR1Q8TCW9 393 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TRAPPC12Q8WVT3 735 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MAL2Q969L2 176 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 WACQ9BTA9 647 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DOCK10Q96BY6 2186 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 BTBD17A6NE02 478 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 F8W036 122 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SHOX2O60902 331 aaPredicted RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 OR8U9P0C7N5 309 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms