RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 NKAIN1Q4KMZ8 207 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 MLIPQ5VWP3 458 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 MRPL14Q6P1L8 145 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 KLC3Q6P597 504 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 BORAQ6PGQ7 559 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ADGRD1Q6QNK2 874 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 TBC1D19Q8N5T2 526 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CSNK1A1LQ8N752 337 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ENDOVQ8N8Q3 282 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 PDPRQ8NCN5 879 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 DCAKDQ8WVC6 231 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SLC5A11Q8WWX8 675 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 THAP4Q8WY91 577 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 NEIL2Q969S2 332 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ISL2Q96A47 359 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 MTBPQ96DY7 904 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 MVB12AQ96EY5 273 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 RUFY1Q96T51 708 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CCDC77Q9BR77 488 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SARGQ9BW04 601 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ALG9Q9H6U8 611 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ZNF304Q9HCX3 659 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CD274Q9NZQ7 290 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 FETUBQ9UGM5 382 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 NDOR1Q9UHB4 597 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 PTBP2Q9UKA9 531 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 TCFL5Q9UL49 500 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CDC14AQ9UNH5 594 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SH2B3Q9UQQ2 575 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 RUVBL1Q9Y265 456 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 PADI2Q9Y2J8 665 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 FEZF1A0PJY2 475 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 SYCE1LA8MT33 242 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 TK2O00142 265 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 TAPBPO15533 448 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 LCMT2O60294 686 aaKnown RBP10.19□□□□□ -0.78
LINC00239-201ENST00000556973 KERAO60938 352 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 H2AFYO75367 372 aaKnown RBP10.19□□□□□ -0.78
LINC00239-201ENST00000556973 IPO13O94829 963 aaKnown RBP10.19□□□□□ -0.78
LINC00239-201ENST00000556973 WDR47O94967 919 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 MYBL2P10244 700 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 PRKAR1AP10644 381 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 COL6A2P12110 1019 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 GMPRP36959 345 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 GDF5P43026 501 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CCR10P46092 362 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 RPS18P62269 152 aaKnown RBP10.19□□□□□ -0.78
LINC00239-201ENST00000556973 FAM53BQ14153 422 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 SSPNQ14714 243 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 TBR1Q16650 682 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 HKDC1Q2TB90 917 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 LINC00303Q3SY05 128 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CATSPEREQ5SY80 951 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 FAM198BQ6UWH4 519 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 OVCH1Q7RTY7 1134 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 PLD3Q8IV08 490 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CENPLQ8N0S6 344 aaPredicted RBP10.19□□□□□ -0.78
LINC00239-201ENST00000556973 MFSD9Q8NBP5 474 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CAMKVQ8NCB2 501 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 KCTD4Q8WVF5 259 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 FKBP10Q96AY3 582 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 TM4SF19Q96DZ7 209 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CABS1Q96KC9 395 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 ATOH8Q96SQ7 321 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 VPS11Q9H270 941 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 SLC26A1Q9H2B4 701 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 ANKZF1Q9H8Y5 726 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 SYNPO2LQ9H987 977 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 PELI2Q9HAT8 420 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 WWOXQ9NZC7 414 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 GPRC5BQ9NZH0 403 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 NUDT4Q9NZJ9 180 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CCDC88CQ9P219 2028 aa10.19□□□□□ -0.78
LINC00239-201ENST00000556973 CACNA1BQ00975 2339 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 TRBC2A0A5B9 178 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 CDC14CA4D256 554 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 TRIM49D1C9J1S8 452 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 MAP2K7O14733 419 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 CLGNO14967 610 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 PRPF4O43172 522 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00239-201ENST00000556973 OR1F1O43749 312 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 STK16O75716 305 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 KLF7O75840 302 aaPredicted RBP10.18□□□□□ -0.78
LINC00239-201ENST00000556973 FURINP09958 794 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 C1GALT1C1LP0DN25 315 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 SFTPCP11686 197 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 CXCR2P25025 360 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 GCAP28676 217 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 MAGEA12P43365 314 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 OR1D4P47884 311 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 HSPA7P48741 367 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 IRF9Q00978 393 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 CDC16Q13042 620 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 DEFB109BQ30KR1 87 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 C18orf21Q32NC0 220 aaPredicted RBP10.18□□□□□ -0.78
LINC00239-201ENST00000556973 ATP1A1-AS1Q5TC04 95 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 NXPE4Q6UWF7 544 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 TIFABQ6ZNK6 161 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms