RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 RNF214Q8ND24 703 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 OR13J1Q8NGT2 312 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 DENND1AQ8TEH3 1009 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 COG1Q8WTW3 980 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 ELMO1Q92556 727 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 SLC22A18Q96BI1 424 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 THOC3Q96J01 351 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 AGAP4Q96P64 663 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 FAM118BQ9BPY3 351 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 CHST11Q9NPF2 352 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 SLC22A11Q9NSA0 550 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 PLA2G3Q9NZ20 509 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 CDC23Q9UJX2 597 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 PLCL2Q9UPR0 1127 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 REXO2Q9Y3B8 237 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 KLK4Q9Y5K2 254 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 PRSS21Q9Y6M0 314 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 CCDC162PA2VCL2 907 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 SOCS6O14544 535 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 GPC4O75487 556 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 DNAJC8O75937 253 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-220ENST00000556486 IPO7O95373 1038 aaKnown RBP9.56□□□□□ -0.88
SCFD1-220ENST00000556486 TPH1P17752 444 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 ITGAXP20702 1163 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 PKLRP30613 574 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 KIR3DL1P43629 444 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 ARSFP54793 590 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 CDH17Q12864 832 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 GRB7Q14451 532 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 IRAK1BP1Q5VVH5 260 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 AADACL2Q6P093 401 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 UNC5DQ6UXZ4 953 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 SPNS3Q6ZMD2 512 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF808Q8N4W9 903 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-220ENST00000556486 DTWD1Q8N5C7 304 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 METTL27Q8N6F8 245 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-220ENST00000556486 LINC01555Q8NAE3 123 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 DLG3Q92796 817 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 PMM1Q92871 262 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 TTC1Q99614 292 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 NDC1Q9BTX1 674 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCFD1-220ENST00000556486 TXLNGQ9NUQ3 528 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 EURLQ9NYK6 297 aa9.56□□□□□ -0.88
SCFD1-220ENST00000556486 A0A1B0GX78 115 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 FITM1A5D6W6 292 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 PCDH17O14917 1159 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 TMPRSS2O15393 492 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ZNHIT1O43257 154 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 SLCO2B1O94956 709 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 RPN2P04844 631 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 CD9P21926 228 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 MST1P26927 711 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 STIP1P31948 543 aaKnown RBP9.55□□□□□ -0.88
SCFD1-220ENST00000556486 CCR7P32248 378 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 NTF4P34130 210 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ADORA2A-AS1P86434 159 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 PMP22Q01453 160 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 TLE4Q04727 773 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 SETDB1Q15047 1291 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 SYTL3Q4VX76 610 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 B3GNTL1Q67FW5 361 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-220ENST00000556486 AFTPHQ6ULP2 937 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 TMEM207Q6UWW9 146 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF534Q76KX8 674 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 NLRP9Q7RTR0 991 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 OVCH1Q7RTY7 1134 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 CEP97Q8IW35 865 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 DCUN1D3Q8IWE4 304 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 SYCE1Q8N0S2 351 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 UBL4BQ8N7F7 174 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 BVESQ8NE79 360 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 HMGCLL1Q8TB92 370 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ASZ1Q8WWH4 475 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 CARD6Q9BX69 1037 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 FRMD8P1Q9BZ68 369 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-220ENST00000556486 TRIM5Q9C035 493 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 EPS8L2Q9H6S3 715 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 MRM3Q9HC36 420 aaKnown RBP9.55□□□□□ -0.88
SCFD1-220ENST00000556486 SEMA3GQ9NS98 782 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 IL1RAPL1Q9NZN1 696 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 NXT1Q9UKK6 140 aaKnown RBP9.55□□□□□ -0.88
SCFD1-220ENST00000556486 KLHL20Q9Y2M5 609 aa9.55□□□□□ -0.88
SCFD1-220ENST00000556486 ANKHD1Q8IWZ3 2542 aaKnown RBP9.54□□□□□ -0.88
SCFD1-220ENST00000556486 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 A0A1W2PQ72 361 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 OR51F1A6NGY5 319 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 VSTM2BA6NLU5 285 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TARM1B6A8C7 271 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 DSCR3O14972 297 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 OR1I1O60431 355 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 ADAM11O75078 769 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 PIM1P11309 404 aaPredicted RBP9.54□□□□□ -0.88
SCFD1-220ENST00000556486 MAGP20916 626 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 ADRA1DP25100 572 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 SSTR2P30874 369 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 ARG2P78540 354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms