RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 UCNP55089 124 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 ARF3P61204 181 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 IRF9Q00978 393 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 TSTA3Q13630 321 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 NAA25Q14CX7 972 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 PRTGQ2VWP7 1150 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 C18orf21Q32NC0 220 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 PTCHD3Q3KNS1 767 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 MANEAQ5SRI9 462 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 CAPN13Q6MZZ7 669 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 RHBDD2Q6NTF9 364 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 WDR93Q6P2C0 686 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 INO80CQ6PI98 192 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 TIFABQ6ZNK6 161 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 RAPH1Q70E73 1250 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 GPSM1Q86YR5 675 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 TMEM126BQ8IUX1 230 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 PLD6Q8N2A8 252 aaKnown RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 ARHGEF39Q8N4T4 335 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 ZNF655Q8N720 491 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 PDPRQ8NCN5 879 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 AENQ8WTP8 325 aaKnown RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 KCTD4Q8WVF5 259 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 MED8Q96G25 268 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 GBP5Q96PP8 586 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 ATOH8Q96SQ7 321 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 SELENOSQ9BQE4 189 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 HAUS8Q9BT25 410 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 SARGQ9BW04 601 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 ACTR5Q9H9F9 607 aaPredicted RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 NMRAL1Q9HBL8 299 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 CPNE5Q9HCH3 593 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 PTBP2Q9UKA9 531 aaKnown RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 PCDHGA6Q9Y5G7 932 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 SPTA1P02549 2419 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 SMG1Q96Q15 3661 aaKnown RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 A0A0J9YVX5 310 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 EXOC1LA0A1B0GW35 172 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 TRIM49D1C9J1S8 452 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 HAT1O14929 419 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ZSCAN9O15535 394 aaPredicted RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 KERAO60938 352 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 KRT38O76015 456 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 SHBGP04278 402 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 SNRPAP09012 282 aaKnown RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 HBQ1P09105 142 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 EZRP15311 586 aaKnown RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 TFEBP19484 476 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ITGAXP20702 1163 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 GDF5P43026 501 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 TMPRSS3P57727 454 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 VSX2P58304 361 aaPredicted RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 VAC14Q08AM6 782 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ACAP2Q15057 778 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ERCC6LQ2NKX8 1250 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 TCTE1Q5JU00 501 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 WASHC2DQ5SRD0 308 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 THEMIS2Q5TEJ8 643 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 BROXQ5VW32 411 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 FAM199XQ6PEV8 388 aaPredicted RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 VN1R4Q7Z5H5 301 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 TBC1D1Q86TI0 1168 aaPredicted RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 THOC6Q86W42 341 aaKnown RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 C17orf64Q86WR6 236 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 PLD3Q8IV08 490 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 GPR135Q8IZ08 494 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 RHEBL1Q8TAI7 183 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 STAG3L4Q8TBR4 150 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 MZB1Q8WU39 189 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 CT55Q8WUE5 264 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 NEIL2Q969S2 332 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 SLC45A3Q96JT2 553 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 RUFY1Q96T51 708 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ZFYVE21Q9BQ24 234 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 TMEM79Q9BSE2 394 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 CHST8Q9H2A9 424 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ALG9Q9H6U8 611 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 SLC22A11Q9NSA0 550 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 STARD5Q9NSY2 213 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 ABCF3Q9NUQ8 709 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.22□□□□□ -0.93
SRP54-210ENST00000556380 CROTQ9UKG9 612 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 TLK1Q9UKI8 766 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 SLC22A14Q9Y267 594 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 IKBKGQ9Y6K9 419 aa9.22□□□□□ -0.93
SRP54-210ENST00000556380 V9GYY5 206 aaPredicted RBP9.22□□□□□ -0.93
SRP54-210ENST00000556380 HYKKA2RU49 373 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 C21orf140B9A014 251 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 MAP2K7O14733 419 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 KLK8O60259 260 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 LCMT2O60294 686 aaKnown RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 PRAMEF4O60810 478 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 KRT37O76014 449 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 RECKO95980 971 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 COL6A2P12110 1019 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 CDH1P12830 882 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 EPORP19235 508 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 TCN2P20062 427 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms