RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ERGP11308 486 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 AMD1P17707 334 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 CD22P20273 847 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PRPS1L1P21108 318 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 KELP23276 732 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 HTR1EP28566 365 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 MSX2P35548 267 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 HALP42357 657 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 CD97P48960 835 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 NEK2P51955 445 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 SESN3P58005 492 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 TAP2Q03519 686 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 SGCGQ13326 291 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 LAPTM5Q13571 262 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 CCSMST1Q4G0I0 132 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 AASDHQ4L235 1098 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 TIGD2Q4W5G0 525 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PAGE2BQ5JRK9 111 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 ATG9BQ674R7 924 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 NANOGP8Q6NSW7 305 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 FAM83HQ6ZRV2 1179 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 LPCAT2Q7L5N7 544 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 SPATA24Q86W54 205 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 RIMKLAQ8IXN7 391 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 LAS2Q8IYD9 372 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 KIAA2013Q8IYS2 634 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 LIX1Q8N485 282 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 RNF148Q8N7C7 305 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 IL17RCQ8NAC3 791 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 TP53I13Q8NBR0 393 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PHC3Q8NDX5 983 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 OR2T34Q8NGX1 318 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 SLC13A3Q8WWT9 602 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 STARD8Q92502 1023 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 GTF2H4Q92759 462 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 POP5Q969H6 163 aaKnown RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 UBE2E3Q969T4 207 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 MSANTD3Q96H12 275 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 ZNF570Q96NI8 536 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 TMEM74Q96NL1 305 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 HBEGFQ99075 208 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 ECSITQ9BQ95 431 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 HAUS8Q9BT25 410 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 EFHD1Q9BUP0 239 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 SLC17A9Q9BYT1 436 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 OSBPL6Q9BZF3 934 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 DPY30Q9C005 99 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 KLHL4Q9C0H6 718 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PCDHAC1Q9H158 963 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 NANOGQ9H9S0 305 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PHPT1Q9NRX4 125 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 CCM2LQ9NUG4 571 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 FBXL12Q9NXK8 326 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 CLDND1Q9NY35 253 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 VPS29Q9UBQ0 182 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 RIMS3Q9UJD0 308 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PACSIN3Q9UKS6 424 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 CNOT11Q9UKZ1 510 aaKnown RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 RUVBL1Q9Y265 456 aaKnown RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 SLC17A4Q9Y2C5 497 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 MAN2B2Q9Y2E5 1009 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 TMEM98Q9Y2Y6 226 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 POLR3HQ9Y535 204 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 AP4S1Q9Y587 144 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 A0A1W2PP55 124 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 A0A1W2PQF6 199 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 ZNF839A8K0R7 811 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 C9JVG2 144 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 E7EQ34 232 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 KCNH1O95259 989 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 DNTTP04053 509 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 PGRP06401 933 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 GPIP06744 558 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 C1GALT1C1LP0DN25 315 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 MYCLP1P12525 358 aaPredicted RBP8□□□□□ -1.13
ATXN3-235ENST00000556082 PIK3CBP42338 1070 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 WASP42768 502 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 BDKRB1P46663 353 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 SOX9P48436 509 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 GSK3BP49841 420 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 MRPS22P82650 360 aaKnown RBP8□□□□□ -1.13
ATXN3-235ENST00000556082 LIPEQ05469 1076 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 GRSF1Q12849 480 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN3-235ENST00000556082 MTAPQ13126 283 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 FGL2Q14314 439 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 CAPRIN1Q14444 709 aaKnown RBP8□□□□□ -1.13
ATXN3-235ENST00000556082 NFE2L1Q14494 772 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 INPP5AQ14642 412 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 PTGR1Q14914 329 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 IRF4Q15306 451 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 MAPKAPK3Q16644 382 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 CYP2A13Q16696 494 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 AAK1Q2M2I8 961 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 DPY19L1Q2PZI1 675 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 FBXO43Q4G163 708 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 LRIF1Q5T3J3 769 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 CAPRIN2Q6IMN6 1127 aaKnown RBP8□□□□□ -1.13
ATXN3-235ENST00000556082 KIAA1211LQ6NV74 962 aa8□□□□□ -1.13
ATXN3-235ENST00000556082 NOXRED1Q6NXP6 359 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms