RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-204	ENST00000555890	CD247	P20963	164 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	C5AR1	P21730	350 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	PIK3R1	P27986	724 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	HNRNPH1	P31943	449 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	RBMX	P38159	391 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ARL1	P40616	181 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	GPR1	P46091	355 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	PSMD8	P48556	350 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	HNMT	P50135	292 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ATP4B	P51164	291 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	GALK1	P51570	392 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	HK3	P52790	923 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CDKL1	Q00532	357 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	DPT	Q07507	201 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	HSPA14	Q0VDF9	509 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	MESP2	Q0VG99	397 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	TMEM115	Q12893	351 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	STX5	Q13190	355 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	SP140	Q13342	867 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CUL3	Q13618	768 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	GTF2H2	Q13888	395 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	GTF2H3	Q13889	308 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CYLC2	Q14093	348 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	BOP1	Q14137	746 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	LRRC32	Q14392	662 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	PON2	Q15165	354 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	NKG7	Q16617	165 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	UGT3A2	Q3SY77	523 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CLEC6A	Q6EIG7	209 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	GTF2H2C	Q6P1K8	395 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	C16orf89	Q6UX73	402 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CHSY3	Q70JA7	882 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	UBE2R2	Q712K3	238 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	RPS27L	Q71UM5	84 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	SPATA19	Q7Z5L4	167 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	MILR1	Q7Z6M3	343 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	MARCH9	Q86YJ5	346 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	PHYKPL	Q8IUZ5	450 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CHPF	Q8IZ52	775 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	GALNT11	Q8NCW6	608 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	RBM15B	Q8NDT2	890 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	UBTD2	Q8WUN7	234 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	TWIST2	Q8WVJ9	160 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	SKA2	Q8WVK7	121 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	TMEM159	Q96B96	161 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	NXPE2	Q96DL1	559 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	NUS1	Q96E22	293 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	C19orf60	Q96EN9	201 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ZNF514	Q96K75	400 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CATSPER2	Q96P56	530 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	LENG8	Q96PV6	779 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ZNF382	Q96SR6	550 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	DPH2	Q9BQC3	489 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CCM2	Q9BSQ5	444 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	LGR4	Q9BXB1	951 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	SLC12A9	Q9BXP2	914 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CD244	Q9BZW8	370 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	RSPH9	Q9H1X1	276 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	EFCAB1	Q9HAE3	211 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	PARVB	Q9HBI1	364 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	RIC8B	Q9NVN3	520 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ARL15	Q9NXU5	204 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	OPTC	Q9UBM4	332 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	EIF2B4	Q9UI10	523 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	PTBP2	Q9UKA9	531 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ADAMTS6	Q9UKP5	1117 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	TMPRSS11E	Q9UL52	423 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	EMC9	Q9Y3B6	208 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	COPG1	Q9Y678	874 aa	Known RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	TLN2	Q9Y4G6	2542 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CSMD2	Q7Z408	3487 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	CKAP5	Q14008	2032 aa		6.62	□□□□□ -1.35
SLIRP-204	ENST00000555890	OR2AG2	A6NM03	316 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890		K7EPI3	171 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	PSMD12	O00232	456 aa	Predicted RBP	6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	E2F3	O00716	465 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	PIP5K1B	O14986	540 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	INPP4B	O15327	924 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	TAPBP	O15533	448 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	TBX1	O43435	398 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	AKAP10	O43572	662 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	AP1G1	O43747	822 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	VEGFD	O43915	354 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	CCNT2	O60583	730 aa	Known RBP	6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	MTX2	O75431	263 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	STK16	O75716	305 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	TM7SF2	O76062	418 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	RECQL5	O94762	991 aa	Predicted RBP	6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	OR4F21	O95013	312 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	EPX	P11678	715 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	HGF	P14210	728 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	CCND1	P24385	295 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	MAP4	P27816	1152 aa	Known RBP	6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	HMOX2	P30519	316 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	IGFALS	P35858	605 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	P2RY2	P41231	377 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	WAS	P42768	502 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	HSPA7	P48741	367 aa		6.61	□□□□□ -1.35
SLIRP-204	ENST00000555890	AGTR2	P50052	363 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms