RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 EFCAB3Q8N7B9 438 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 MIB2Q96AX9 1013 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 MMABQ96EY8 250 aaPredicted RBP17.52■□□□□ 0.4
NEDD1-208ENST00000555806 DRC3Q9H069 523 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 SAYSD1Q9NPB0 183 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 NSMCE4AQ9NXX6 385 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 LUZP4Q9P127 313 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 WHRNQ9P202 907 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 C5AR2Q9P296 337 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 C3orf18Q9UK00 162 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 SH2B3Q9UQQ2 575 aa17.52■□□□□ 0.4
NEDD1-208ENST00000555806 MDC1Q14676 2089 aaKnown RBP17.52■□□□□ 0.39
NEDD1-208ENST00000555806 A0A0A6YYC8 382 aaPredicted RBP17.51■□□□□ 0.39
NEDD1-208ENST00000555806 I3L1I5 382 aaPredicted RBP17.51■□□□□ 0.39
NEDD1-208ENST00000555806 GUCA1CO95843 209 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 AP1S2P56377 157 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 CSNK1G2P78368 415 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 DSG2Q14126 1118 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 VWA2Q5GFL6 755 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 IRAK1BP1Q5VVH5 260 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 JMJD6Q6NYC1 403 aaPredicted RBP17.51■□□□□ 0.39
NEDD1-208ENST00000555806 KIRREL2Q6UWL6 708 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 LCTLQ6UWM7 567 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 SLC26A11Q86WA9 606 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 ZC3HC1Q86WB0 502 aaKnown RBP17.51■□□□□ 0.39
NEDD1-208ENST00000555806 ATCAYQ86WG3 371 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 RBMXL3Q8N7X1 1067 aaKnown RBP17.51■□□□□ 0.39
NEDD1-208ENST00000555806 CPT1CQ8TCG5 803 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 PYROXD1Q8WU10 500 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 SGPP1Q9BX95 441 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 SLAMF7Q9NQ25 335 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 MOCS1Q9NZB8 636 aa17.51■□□□□ 0.39
NEDD1-208ENST00000555806 UBR5O95071 2799 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-208ENST00000555806 MAP2K7O14733 419 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 IPO13O94829 963 aaKnown RBP17.5■□□□□ 0.39
NEDD1-208ENST00000555806 CDH1P12830 882 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 ZNF37AP17032 561 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-208ENST00000555806 GRK3P35626 688 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 AVPR1BP47901 424 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 ZNF460Q14592 562 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 DUPD1Q68J44 220 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 SLC6A19Q695T7 634 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 ATL1Q8WXF7 558 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 PYCR2Q96C36 320 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 HAUS8Q9BT25 410 aa17.5■□□□□ 0.39
NEDD1-208ENST00000555806 ZNF552Q9H707 407 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-208ENST00000555806 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
NEDD1-208ENST00000555806 IGLV3-12A0A075B6K2 115 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 FEZF1A0PJY2 475 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 EIF3HO15372 352 aaKnown RBP eCLIP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 FOXS1O43638 330 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 SORBS2O94875 1100 aaKnown RBP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 ENO2P09104 434 aaPredicted RBP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 ACPPP15309 386 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 SSTR1P30872 391 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 SLC26A3P40879 764 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 SOX8P57073 446 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 FAM53BQ14153 422 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 TMEM207Q6UWW9 146 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 VN1R4Q7Z5H5 301 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 PARP9Q8IXQ6 854 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 ARHGEF39Q8N4T4 335 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 NKAPQ8N5F7 415 aaKnown RBP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 AMER3Q8N944 861 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 OR11G2Q8NGC1 345 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 TM9SF4Q92544 642 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 CDKL2Q92772 493 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 PNPLA2Q96AD5 504 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 FBXL8Q96CD0 374 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 THAP11Q96EK4 314 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 PDLIM5Q96HC4 596 aaKnown RBP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 VPS39Q96JC1 886 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 RHOJQ9H4E5 214 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 MKKSQ9NPJ1 570 aaPredicted RBP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 C14orf105Q9NVL8 296 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 MAP10Q9P2G4 905 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 TXNDC16Q9P2K2 825 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 IKZF3Q9UKT9 509 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 MRPS2Q9Y399 296 aaKnown RBP17.49■□□□□ 0.39
NEDD1-208ENST00000555806 MAP4K5Q9Y4K4 846 aa17.49■□□□□ 0.39
NEDD1-208ENST00000555806 KCNE1BA0A087WTH5 132 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 NPEPPSL1A6NEC2 478 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 IDSB3KWA1 339 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 PIAS1O75925 651 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 HEXBP07686 556 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 NPPBP16860 134 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 BCL6P41182 706 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 CCR8P51685 355 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 EMP2P54851 167 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 SLC12A2P55011 1212 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 TAS2R39P59534 338 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 MAT1AQ00266 395 aaKnown RBP17.48■□□□□ 0.39
NEDD1-208ENST00000555806 CBLBQ13191 982 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 SYT16Q17RD7 645 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 SBSNQ6UWP8 590 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 ASPGQ86U10 573 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 LAPTM4BQ86VI4 370 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 CAMKVQ8NCB2 501 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 OR56A3Q8NH54 315 aa17.48■□□□□ 0.39
NEDD1-208ENST00000555806 ZCCHC10Q8TBK6 192 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms