RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PTPRBP23467 1997 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 H3BQF6 201 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 PPP6CO00743 305 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 HAT1O14929 419 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 POLR1CO15160 346 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-219ENST00000555323 DXOO77932 396 aaKnown RBP12.14□□□□□ -0.47
SYNE2-219ENST00000555323 CLDN9O95484 217 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 MLYCDO95822 493 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 JMJD7P0C870 316 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 CD22P20273 847 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 VARSP26640 1264 aaKnown RBP12.14□□□□□ -0.47
SYNE2-219ENST00000555323 GSTM2P28161 218 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 AHRP35869 848 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SERPINB5P36952 375 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 ETV5P41161 510 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 HNF4AP41235 474 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SCTRP47872 440 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 RAB15P59190 212 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SHC2P98077 582 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 REEP5Q00765 189 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 GGTA1PQ4G0N0 100 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 XKR6Q5GH73 641 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 PAGE2BQ5JRK9 111 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 MANEAQ5SRI9 462 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 GRHL2Q6ISB3 625 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 ERMP1Q7Z2K6 904 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 ADCK2Q7Z695 626 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 NUDCD3Q8IVD9 361 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 LAS2Q8IYD9 372 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 LSMEM2Q8N112 164 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 MFSD9Q8NBP5 474 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 OR52B6Q8NGF0 335 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 MOCOSQ96EN8 888 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 MAGEB10Q96LZ2 347 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 TAAR9Q96RI9 348 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 ZPBPQ9BS86 351 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 TRMOQ9BU70 441 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 MECRQ9BV79 373 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 DDA1Q9BW61 102 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SPNS1Q9H2V7 528 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SEMA4BQ9NPR2 832 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SLC39A1Q9NY26 324 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SERTAD3Q9UJW9 196 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF225Q9UK10 706 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF490Q9ULM2 529 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-219ENST00000555323 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
SYNE2-219ENST00000555323 SNRNP200O75643 2136 aaKnown RBP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 LOC105369274A0A096LPK9 316 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 LOC102723532A0A0G2JNH3 316 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 A0A0J9YVX5 310 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 FITM1A5D6W6 292 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 H0YGG7 62 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 H0YIV9 168 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 NPHS1O60500 1241 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 OTCP00480 354 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 HGFP14210 728 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ITIH1P19827 911 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 GCGRP47871 477 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 CCNG1P51959 295 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 EMP3P54852 163 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TRAF3Q13114 568 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TUBB3Q13509 450 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 GPR19Q15760 415 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 C3orf38Q5JPI3 329 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TCTE1Q5JU00 501 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 FRMPD2BQ6IN97 320 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TLDC1Q6P9B6 456 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TMIGD1Q6UXZ0 262 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 FRMD7Q6ZUT3 714 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 RPS27LQ71UM5 84 aaKnown RBP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 MILR1Q7Z6M3 343 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 OR4N4Q8N0Y3 316 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 KRT78Q8N1N4 520 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TBC1D19Q8N5T2 526 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF740Q8NDX6 193 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TTLQ8NG68 377 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 OR1L3Q8NH93 324 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TRPC4APQ8TEL6 797 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 UBE2E3Q969T4 207 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ATP6V1E2Q96A05 226 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 TEFMQ96QE5 360 aaKnown RBP12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF382Q96SR6 550 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ASPSCR1Q9BZE9 553 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 SPRY4Q9C004 299 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 RHBGQ9H310 441 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ACTR8Q9H981 624 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 SYNPO2LQ9H987 977 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 FANCEQ9HB96 536 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 APMAPQ9HDC9 416 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 NKIRAS1Q9NYS0 192 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 ZFP69BQ9UJL9 534 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms