RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CCND1P24385 295 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 GRK6P43250 576 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 INHBCP55103 352 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 BIRC2Q13490 618 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 NR1D2Q14995 579 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 SF1Q15637 639 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 GGTA1PQ4G0N0 100 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 XKR7Q5GH72 579 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 ATG9BQ674R7 924 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 FCRL6Q6DN72 434 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 GRHL2Q6ISB3 625 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 IRGCQ6NXR0 463 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 Q6ZSR9 355 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 ADCK2Q7Z695 626 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 KIAA2013Q8IYS2 634 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MAELQ96JY0 434 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 TGM7Q96PF1 710 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MTERF1Q99551 399 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 KCNH6Q9H252 994 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 AKTIPQ9H8T0 292 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 FAM60AQ9NP50 221 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 TCF7L2Q9NQB0 619 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 GPRC5BQ9NZH0 403 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 ARMCX1Q9P291 453 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 ZNF490Q9ULM2 529 aaPredicted RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 PCDHB11Q9Y5F2 797 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 FER1L5A0AVI2 2057 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 IGHV5-51A0A0C4DH38 117 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ZNF839A8K0R7 811 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 A8MU76 341 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SLCO1B7G3V0H7 640 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 CAPN5O15484 640 aaPredicted RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 CTSVO60911 334 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 LDOC1O95751 146 aaPredicted RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 C1GALT1C1LP0DN25 315 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 PCNAP12004 261 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 AMD1P17707 334 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 CAPZBP47756 277 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 HK2P52789 917 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 DAB2P98082 770 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 PRDX1Q06830 199 aaKnown RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 SNAP47Q5SQN1 464 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 LIPJQ5W064 366 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 RIPOR1Q6ZS17 1223 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 FAM129CQ86XR2 697 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SHISA5Q8N114 240 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 AFAP1L2Q8N4X5 818 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 FITM2Q8N6M3 262 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ZFPM2Q8WW38 1151 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 USP7Q93009 1102 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 PTCD3Q96EY7 689 aaKnown RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 FAR2Q96K12 515 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 PLCD4Q9BRC7 762 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 HAUS8Q9BT25 410 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 DPH7Q9BTV6 452 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ELOVL6Q9H5J4 265 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 UCK1Q9HA47 277 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 TOR4AQ9NXH8 423 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 STK38LQ9Y2H1 464 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 PCDHGB2Q9Y5G2 931 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 TRPC5OSA6NMA1 111 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 HAT1O14929 419 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 FLRT2O43155 660 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 LRP3O75074 770 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 PEX11AO75192 247 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ETHE1O95571 254 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 TBX6O95947 436 aaPredicted RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 ALDOCP09972 364 aaKnown RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 PPM1FP49593 454 aaPredicted RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 CYP4F2P78329 520 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 CSNK1G2P78368 415 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 E2F2Q14209 437 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 GALNTL6Q49A17 601 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 FRG2Q64ET8 278 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SPESP1Q6UW49 350 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 VN1R5Q7Z5H4 357 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ANKRD53Q8N9V6 530 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 OR7G3Q8NG95 312 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 WDR20Q8TBZ3 569 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SELENOMQ8WWX9 145 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 TUBGCP3Q96CW5 907 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 WDR34Q96EX3 536 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 CATSPER2Q96P56 530 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 FRG2BQ96QU4 278 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SLC29A3Q9BZD2 475 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 ACPTQ9BZG2 426 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 MRPS30Q9NP92 439 aaKnown RBP10.33□□□□□ -0.76
TDP1-211ENST00000555178 POMT2Q9UKY4 750 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 CCL27Q9Y4X3 112 aa10.33□□□□□ -0.76
TDP1-211ENST00000555178 SPTBN2O15020 2390 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 SPTBN4Q9H254 2564 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 SLC9B1P1A6NJY1 282 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 MAGEB17A8MXT2 336 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 FCHO1O14526 889 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 UGDHO60701 494 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 ULK1O75385 1050 aa10.32□□□□□ -0.76
TDP1-211ENST00000555178 CHEK2O96017 543 aa10.32□□□□□ -0.76
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